Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03098 and RBAM_018830

See DNA alignment / Visit BSNT_03098 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:57
# Commandline: needle
#    -asequence pep-align/BSNT_03098___yobL.1.9828.seq
#    -bsequence pep-align/RBAM_018830___yobL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03098___yobL-RBAM_018830___yobL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03098___yobL-RBAM_018830___yobL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03098___yobL
# 2: RBAM_018830___yobL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 600
# Identity:     436/600 (72.7%)
# Similarity:   512/600 (85.3%)
# Gaps:           1/600 ( 0.2%)
# Score: 2335.0
# 
#
#=======================================

BSNT_03098___      1 MKVFEADSLLFEADKRTKEYKELRSQMVKLRKAFQNVANLDDSEFSGKGA     50
                     ||||||.|.:..|:||.|:|.::|.|.:.||||||.:|:|||||||||||
RBAM_018830__      1 MKVFEAASFISAAEKRAKQYDQIREQFINLRKAFQGMADLDDSEFSGKGA     50

BSNT_03098___     51 DNIKAFYHDHVGVTDQWIDLIDMKIAFLSSMSAKLEDAKMSDAYIEESFL    100
                     ||||||:.||.||||.|::|||||||||:|:|.|:.||.::|:::|||||
RBAM_018830__     51 DNIKAFFQDHAGVTDSWLNLIDMKIAFLNSISGKVSDAGLADSFVEESFL    100

BSNT_03098___    101 EHELANAYTKSKSIMSEQKKAMKDILNDINDILPLEIFSTEDFKDKLSSA    150
                     ||||.:|...|::||.||:..||.||::|:||:.|::|||||...||.||
RBAM_018830__    101 EHELTHAKNTSQAIMQEQRNEMKGILDEISDIIHLDVFSTEDVDQKLESA    150

BSNT_03098___    151 DDKREKTIDKLNKLDEDLKTEYAETEPNEQFIQQDFKKLQESTGKGKNAT    200
                     |.||..||.||.|||.||..||||||.||.|||.||::||.:||||||||
RBAM_018830__    151 DKKRNDTIHKLGKLDHDLTKEYAETEANEHFIQADFQQLQNATGKGKNAT    200

BSNT_03098___    201 PIHYNAKAYRESDIHKKKGDIEKHSEAYLSVKKEEAKDREIKELKKKLND    250
                     |:||||||||||||||||.:|.:||:.||:.||||||:||||:|||||.|
RBAM_018830__    201 PLHYNAKAYRESDIHKKKDEIARHSDTYLTFKKEEAKEREIKDLKKKLAD    250

BSNT_03098___    251 GVSDPVEYLEIAKKVGYENLEPAQVQLAVQIEQAKQLEGAGEITWDIVKG    300
                     ||:||.||||||||:|||||||:|.|..:|:|||||||.|||:||||:||
RBAM_018830__    251 GVTDPDEYLEIAKKIGYENLEPSQQQYVIQLEQAKQLEEAGEVTWDILKG    300

BSNT_03098___    301 VGVGLYDVGKDTVTGIWDFITDPGETLSALGNAVIHPVKTYDAISAAIEE    350
                     .||||||||||||:|:|..||.|.|.:..:..||.||:.||:|||.||||
RBAM_018830__    301 AGVGLYDVGKDTVSGLWQLITKPDEVVEGIIGAVAHPINTYNAISTAIEE    350

BSNT_03098___    351 SYQKDMVNGDAYSRSRWVTYAVGSVAVAVFGTKGAGAINKADAAGKVINK    400
                     ||||||||||||||||||||||||.||||.|||||||:||||||||||||
RBAM_018830__    351 SYQKDMVNGDAYSRSRWVTYAVGSAAVAVVGTKGAGAVNKADAAGKVINK    400

BSNT_03098___    401 ASQAGKKIKDVKIPDLLPYNPKYDFPLADNVPYNVVDSQSLKNELLTNAK    450
                     |.||||||||||:|:|||||.|||..|:.:|||||||||:||||||||||
RBAM_018830__    401 AGQAGKKIKDVKLPELLPYNSKYDLALSGDVPYNVVDSQNLKNELLTNAK    450

BSNT_03098___    451 KIPDGTRKPFTGQKISPPWLNKEKYDAYEIEGKVKAKGKVKDVSRRVYTM    500
                     |||||||||||||:|:.||||||||.|.||:||||.||:::||||||||:
RBAM_018830__    451 KIPDGTRKPFTGQEINLPWLNKEKYGAVEIDGKVKVKGQIRDVSRRVYTL    500

BSNT_03098___    501 KDIDINQKTEFGVTNLQLMKNGNAPYAEDGTQINLHHLIQEEPGPMLEIP    550
                     |||||||||..|.|||:|||:|.:|||:||||||||||||||.||:||||
RBAM_018830__    501 KDIDINQKTPKGKTNLELMKDGKSPYAKDGTQINLHHLIQEESGPLLEIP    550

BSNT_03098___    551 NSLHTKYSDVIHQLKSDGESFRNDKVLKAQYESFRKRYWKWRAKQFENEN    600
                     ||||||||||||.||.:|||||||..|:.||::|:.|||||||||:|.| 
RBAM_018830__    551 NSLHTKYSDVIHGLKGNGESFRNDVYLEKQYDNFKTRYWKWRAKQYEKE-    599


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03098 and RBAM_018830

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
