Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03079 and RBAM_018800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:57
# Commandline: needle
# -asequence pep-align/BSNT_03079.1.9828.seq
# -bsequence pep-align/RBAM_018800.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03079-RBAM_018800.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03079-RBAM_018800.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03079
# 2: RBAM_018800
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 106/200 (53.0%)
# Similarity: 140/200 (70.0%)
# Gaps: 21/200 (10.5%)
# Score: 552.5
#
#
#=======================================
BSNT_03079 1 ----MDYSKELKDLFLMQQSYATLFSTLNKIQSRGDDYYESLTSRQFMTM 46
||.:..:|:|.:||||||:|||.:||:|:|||:|.|.|||||.||:
RBAM_018800 1 MGDIMDINLLMKELHVMQQSYASLFSVVNKVQARGDEYLEMLTSRQHMTL 50
BSNT_03079 47 VAILHLPEEETTFNNIAKKLGTSKQNINRLVSGIEKRGYVITVPSKRDKR 96
:||.|||.|:||..||||||||:||..|:|:|.:.|:|||.|||||.|||
RBAM_018800 51 IAIAHLPTEDTTLMNIAKKLGTTKQTANKLISSLAKKGYVHTVPSKLDKR 100
BSNT_03079 97 AVNVKITDSGKRVMEECGEKAVYFMADLFKGFSTEELETLWILLKKLYSF 146
|:|::||..||:.:..|.||:.||:||:|..|:|:|:||.|.||:|||.|
RBAM_018800 101 AINIEITPEGKKALISCSEKSTYFLADMFHDFTTDEIETFWRLLQKLYRF 150
BSNT_03079 147 DGEEQDGFE-------EDAADFDIEQNRDNLKTNLLQEFAKRRK------ 183
||||||||| ||.|.| ..|:.:..::.||:|||.
RBAM_018800 151 DGEEQDGFEEKAHLKVEDQAQF----ISDDYEEKIMAEFSKRRYGSADDE 196
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