Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03070 and RBAM_018710

See DNA alignment / Visit BSNT_03070 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:57
# Commandline: needle
#    -asequence pep-align/BSNT_03070___yoxD.1.9828.seq
#    -bsequence pep-align/RBAM_018710___fabG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03070___yoxD-RBAM_018710___fabG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03070___yoxD-RBAM_018710___fabG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03070___yoxD
# 2: RBAM_018710___fabG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 241
# Identity:     211/241 (87.6%)
# Similarity:   229/241 (95.0%)
# Gaps:           3/241 ( 1.2%)
# Score: 1061.0
# 
#
#=======================================

BSNT_03070___      1 ---MQSLQHKTALITGGGRGIGRATALALAKEGVNIGLIGRTAANVEKVA     47
                        ::|||:|||||||.|||||||.|:|||||||||||||||.|||||||
RBAM_018710__      1 MKDVESLQNKTALITGAGRGIGRAAAIALAKEGVNIGLIGRTEANVEKVA     50

BSNT_03070___     48 EEVKALGVKAAFAAADVKDAEQVNQAVAQVKEQLGDIDILINNAGISKFG     97
                     ||||||||||:|||||||:.::|.|||:.:||:||:||||||||||||||
RBAM_018710__     51 EEVKALGVKASFAAADVKNQKEVEQAVSSIKEELGEIDILINNAGISKFG    100

BSNT_03070___     98 GFLDLSADEWENIIQVNLMGVYHVTRAVLPEMIERKAGDIINISSTAGQR    147
                     |||||:.:|||:|||||:||||||||||||||||||:|||||||||||||
RBAM_018710__    101 GFLDLTPEEWEDIIQVNVMGVYHVTRAVLPEMIERKSGDIINISSTAGQR    150

BSNT_03070___    148 GAAVTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASDMSIELN    197
                     |||.|||||||||||||||||||||||||||||||:||||||||||||||
RBAM_018710__    151 GAAATSAYSASKFAVLGLTESLMQEVRKHNIRVSAMTPSTVASDMSIELN    200

BSNT_03070___    198 LTDGNPEKVMQPEDLAEYMVAQLKLDPRIFIKTAGLWSTNP    238
                     |||||||||||||||||||||||||.|||||||||||||||
RBAM_018710__    201 LTDGNPEKVMQPEDLAEYMVAQLKLHPRIFIKTAGLWSTNP    241


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