Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03070 and RBAM_018710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:57
# Commandline: needle
# -asequence dna-align/BSNT_03070___yoxD.1.9828.seq
# -bsequence dna-align/RBAM_018710___fabG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03070___yoxD-RBAM_018710___fabG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03070___yoxD-RBAM_018710___fabG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03070___yoxD
# 2: RBAM_018710___fabG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 731
# Identity: 571/731 (78.1%)
# Similarity: 571/731 (78.1%)
# Gaps: 19/731 ( 2.6%)
# Score: 2219.5
#
#
#=======================================
BSNT_03070___ 1 ---------TTGCAAAGTTTACAACATAAAACTGCACTAATCACAGGCGG 41
.||.|||||||||||.|.|||||.||.||.|||||.||.|.
RBAM_018710__ 1 GTGAAAGACGTGGAAAGTTTACAAAACAAAACGGCTCTTATCACGGGTGC 50
BSNT_03070___ 42 AGGCAGAGGAATTGGCCGTGCTACAGCTCTTGCTCTTGCGAAAGAAGGCG 91
.|||||||||||.|||||.||..|.|||.|.|||.|.||.||||||||.|
RBAM_018710__ 51 GGGCAGAGGAATCGGCCGCGCCGCCGCTATCGCTTTAGCCAAAGAAGGAG 100
BSNT_03070___ 92 TAAATATTGGGTTAATCGGCCGGACTGCCGCTAATGTTGAAAAAGTGGCA 141
|.|||||.||.|||||||||||.||.|..||.|||||.|||||.||.||.
RBAM_018710__ 101 TCAATATCGGTTTAATCGGCCGCACAGAAGCAAATGTCGAAAAGGTTGCG 150
BSNT_03070___ 142 GAAGAAGTCAAAGCGCTTGGTGTAAAAGCTGCATTTGCTGCTGCAGATGT 191
||||||||.|||||.|||||||||||.||..||||.||||||||.|||||
RBAM_018710__ 151 GAAGAAGTGAAAGCCCTTGGTGTAAAGGCATCATTCGCTGCTGCCGATGT 200
BSNT_03070___ 192 AAAAGATGCC---GAGCAGGTTAACCAAGCCGTC-GCTCAAGTGAAAGAA 237
||||.| || .|| ||||..|.||||||||| .|||.| |.||||||
RBAM_018710__ 201 AAAAAA--CCAAAAAG-AGGTAGAGCAAGCCGTCTCCTCTA-TTAAAGAA 246
BSNT_03070___ 238 CAGCTTGGTGATATCGATATTCTCATTAATAACGCGGGAATCAGCAAATT 287
.|.||.|||||.||.||.||..|.||||||||.||.||||||||||||||
RBAM_018710__ 247 GAACTCGGTGAGATTGACATCTTGATTAATAATGCCGGAATCAGCAAATT 296
BSNT_03070___ 288 TGGCGGTTTCTTAGATCTGTCAGCC-GATGAATGGGAAAATATTATACAA 336
.|||||.||.||.||||| |..||| ||.||.||||||.|.||.||.|||
RBAM_018710__ 297 CGGCGGATTTTTGGATCT-TACGCCTGAAGAGTGGGAAGACATCATTCAA 345
BSNT_03070___ 337 GTCAACCTAATGGGTGTGTATCATGTGACTCGCGCGGTGCTTCCGGAAAT 386
||.||..||||||||||.||.||.|||||.|||||.||.||.||.|||||
RBAM_018710__ 346 GTGAATGTAATGGGTGTATACCACGTGACACGCGCCGTTCTACCTGAAAT 395
BSNT_03070___ 387 GATCGAACGCAAAGCCGGAGATATCATTAATATTTCGTCTACAGCGGGCC 436
|||.||..|.|||.|.||||||||||||||||||||.|||||.|||||||
RBAM_018710__ 396 GATTGAGAGAAAATCAGGAGATATCATTAATATTTCTTCTACGGCGGGCC 445
BSNT_03070___ 437 AAAGAGGAGCTGCTGTAACAAGTGCTTATAGCGCTTCTAAATTTGCCGTT 486
|||||||.||.||.|..||||||||.||.|||||||||||||||||||||
RBAM_018710__ 446 AAAGAGGCGCCGCGGCGACAAGTGCGTACAGCGCTTCTAAATTTGCCGTT 495
BSNT_03070___ 487 CTAGGGTTAACAGAGTCTCTTATGCAAGAAGTGAGAAAACATAATATCAG 536
||.||..|.||.||.|||||.|||||.|||||.||||||||.||||||.|
RBAM_018710__ 496 CTCGGTCTGACTGAATCTCTCATGCAGGAAGTCAGAAAACACAATATCCG 545
BSNT_03070___ 537 AGTCAGCGCGTTAACGCCGAGCACTGTCGCTAGTGATATGTCTATCGAAT 586
.||||||||..|.||.||||||||.||.||.||.||.||||||||.||||
RBAM_018710__ 546 TGTCAGCGCAATGACTCCGAGCACGGTTGCCAGCGACATGTCTATTGAAT 595
BSNT_03070___ 587 TGAACTTAACAGACGGTAATCCTGAAAAAGTTATGCAGCCTGAGGATCTT 636
|.||..|.||||||||.|||||.||||||||.|||||.||||||||||||
RBAM_018710__ 596 TAAATCTGACAGACGGCAATCCGGAAAAAGTCATGCAACCTGAGGATCTT 645
BSNT_03070___ 637 GCTGAGTACATGGTGGCACAATTGAAATTAGATCCTCGTATTTTCATCAA 686
||.||.||.|||||.||.||||||||||||.||||.||.|||||||||||
RBAM_018710__ 646 GCAGAATATATGGTTGCTCAATTGAAATTACATCCGCGCATTTTCATCAA 695
BSNT_03070___ 687 AACAGCGGGATTATGGTCAACAAATCCTTAA 717
|||.||.||.||.||||||||.|||||||||
RBAM_018710__ 696 AACTGCCGGTTTGTGGTCAACTAATCCTTAA 726
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