Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03068 and RBAM_018660

See DNA alignment / Visit BSNT_03068 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:57
# Commandline: needle
#    -asequence pep-align/BSNT_03068.1.9828.seq
#    -bsequence pep-align/RBAM_018660___rtp.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03068-RBAM_018660___rtp.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03068-RBAM_018660___rtp.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03068
# 2: RBAM_018660___rtp
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 125
# Identity:      58/125 (46.4%)
# Similarity:    61/125 (48.8%)
# Gaps:          63/125 (50.4%)
# Score: 301.0
# 
#
#=======================================

BSNT_03068         0 --------------------------------------------------      0
                                                                       
RBAM_018660__      1 MHILKEEKRSSTGFLVKQRAFLKLYMITMTEQERLYGLKLLEVLRSEFKP     50

BSNT_03068         1 -------------MHELLDDGILKQIKVKKEGAKLQEVVLYQFKDYEAAK     37
                                  :|||||||||||:||||||||||||||||||||||||
RBAM_018660__     51 IGFKPNHTEVYRSLHELLDDGILKQVKVKKEGAKLQEVVLYQFKDYEAAK    100

BSNT_03068        38 LYKKQLKVELDRCKKLIEKALSDNF     62
                     |||||||.||||||||||||:||||
RBAM_018660__    101 LYKKQLKTELDRCKKLIEKAISDNF    125


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