Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03058 and RBAM_018640

See DNA alignment / Visit BSNT_03058 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:57
# Commandline: needle
#    -asequence pep-align/BSNT_03058.1.9828.seq
#    -bsequence pep-align/RBAM_018640___proJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03058-RBAM_018640___proJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03058-RBAM_018640___proJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03058
# 2: RBAM_018640___proJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 375
# Identity:     180/375 (48.0%)
# Similarity:   211/375 (56.3%)
# Gaps:         130/375 (34.7%)
# Score: 917.5
# 
#
#=======================================

BSNT_03058         0 --------------------------------------------------      0
                                                                       
RBAM_018640__      1 MTSRTKIKRVAVKIGSSSLTSLHGEISRRKLEALVDQIAQLKDSGYEVIL     50

BSNT_03058         0 --------------------------------------------------      0
                                                                       
RBAM_018640__     51 VSSGAVAAGYRKLGFIQKPESLPEKQASASIGQGLLMEAYSKLFLAHGYV    100

BSNT_03058         1 -----------------------MNVLLERGIIPIINENDTVTVNRLKFG     27
                                            ||||||||||||||||||||||||:||
RBAM_018640__    101 ASQILITRSDFSDEYRYHNVRNTMNVLLERGIIPIINENDTVTVNRLRFG    150

BSNT_03058        28 DNDTLAAKVAGLIDADMLVILSDIDGLYDGNPRTNPEAKRIQRVSEITPD     77
                     |||||||||||||||||||||||||||||.|||:||:||||:.||:|||:
RBAM_018640__    151 DNDTLAAKVAGLIDADMLVILSDIDGLYDDNPRSNPKAKRIRHVSDITPE    200

BSNT_03058        78 IEACAGDTGSIVGTGGMRSKLDAFKIVMASGIKGFLGQADAGDILYHAVH    127
                     |||.|||.||.:|||||||||||||||||||||||||||:..|||..||.
RBAM_018640__    201 IEASAGDAGSEMGTGGMRSKLDAFKIVMASGIKGFLGQANIPDILLQAVD    250

BSNT_03058       128 EQAEGTYFEAEGTLPLNQKEKWIAFNSGPEGEMFLSDDCSRKITNGQSSL    177
                     |.|||||||||||||||.||:|:|||||||||:.:..:.||.:.||...|
RBAM_018640__    251 EAAEGTYFEAEGTLPLNHKEQWLAFNSGPEGEIVMEKESSRDVANGNMEL    300

BSNT_03058       178 YLDGVQKIKGKFKSGSVVRLMDSKGTEIGLGIVNYSSVQL----QEPEKK    223
                     ....:::|||:|.||:||||:|.:|.|:|||||||||.||    :.|.|:
RBAM_018640__    301 SPQDIEQIKGRFSSGAVVRLLDQQGEELGLGIVNYSSAQLKTFKETPPKQ    350

BSNT_03058       224 KELTNRALIDQEAFVCHVDFSLPVN    248
                        |::::||.|||||||:.|:|:.
RBAM_018640__    351 ---TDQSVIDPEAFVCHVELSIPIG    372


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