Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03058 and RBAM_018640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:57
# Commandline: needle
# -asequence pep-align/BSNT_03058.1.9828.seq
# -bsequence pep-align/RBAM_018640___proJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03058-RBAM_018640___proJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03058-RBAM_018640___proJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03058
# 2: RBAM_018640___proJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 375
# Identity: 180/375 (48.0%)
# Similarity: 211/375 (56.3%)
# Gaps: 130/375 (34.7%)
# Score: 917.5
#
#
#=======================================
BSNT_03058 0 -------------------------------------------------- 0
RBAM_018640__ 1 MTSRTKIKRVAVKIGSSSLTSLHGEISRRKLEALVDQIAQLKDSGYEVIL 50
BSNT_03058 0 -------------------------------------------------- 0
RBAM_018640__ 51 VSSGAVAAGYRKLGFIQKPESLPEKQASASIGQGLLMEAYSKLFLAHGYV 100
BSNT_03058 1 -----------------------MNVLLERGIIPIINENDTVTVNRLKFG 27
||||||||||||||||||||||||:||
RBAM_018640__ 101 ASQILITRSDFSDEYRYHNVRNTMNVLLERGIIPIINENDTVTVNRLRFG 150
BSNT_03058 28 DNDTLAAKVAGLIDADMLVILSDIDGLYDGNPRTNPEAKRIQRVSEITPD 77
|||||||||||||||||||||||||||||.|||:||:||||:.||:|||:
RBAM_018640__ 151 DNDTLAAKVAGLIDADMLVILSDIDGLYDDNPRSNPKAKRIRHVSDITPE 200
BSNT_03058 78 IEACAGDTGSIVGTGGMRSKLDAFKIVMASGIKGFLGQADAGDILYHAVH 127
|||.|||.||.:|||||||||||||||||||||||||||:..|||..||.
RBAM_018640__ 201 IEASAGDAGSEMGTGGMRSKLDAFKIVMASGIKGFLGQANIPDILLQAVD 250
BSNT_03058 128 EQAEGTYFEAEGTLPLNQKEKWIAFNSGPEGEMFLSDDCSRKITNGQSSL 177
|.|||||||||||||||.||:|:|||||||||:.:..:.||.:.||...|
RBAM_018640__ 251 EAAEGTYFEAEGTLPLNHKEQWLAFNSGPEGEIVMEKESSRDVANGNMEL 300
BSNT_03058 178 YLDGVQKIKGKFKSGSVVRLMDSKGTEIGLGIVNYSSVQL----QEPEKK 223
....:::|||:|.||:||||:|.:|.|:|||||||||.|| :.|.|:
RBAM_018640__ 301 SPQDIEQIKGRFSSGAVVRLLDQQGEELGLGIVNYSSAQLKTFKETPPKQ 350
BSNT_03058 224 KELTNRALIDQEAFVCHVDFSLPVN 248
|::::||.|||||||:.|:|:.
RBAM_018640__ 351 ---TDQSVIDPEAFVCHVELSIPIG 372
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