Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03052 and RBAM_018590

See DNA alignment / Visit BSNT_03052 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:55
# Commandline: needle
#    -asequence pep-align/BSNT_03052___yogA.1.9828.seq
#    -bsequence pep-align/RBAM_018590___yogA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03052___yogA-RBAM_018590___yogA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03052___yogA-RBAM_018590___yogA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03052___yogA
# 2: RBAM_018590___yogA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 332
# Identity:     211/332 (63.6%)
# Similarity:   257/332 (77.4%)
# Gaps:           8/332 ( 2.4%)
# Score: 1117.0
# 
#
#=======================================

BSNT_03052___      1 -MKA-VIHNGKAGLLGLSVQDVPSTKPGYGEVKVKLKSAGLNHRDLFLMK     48
                      |.| :||..     |...:..|..:||.||||:|||:||||||||||||
RBAM_018590__      1 MMNALIIHEN-----GFDFRQAPDKRPGNGEVKIKLKTAGLNHRDLFLMK     45

BSNT_03052___     49 NKSEQDPHMILGSDGAGIIEEIGEGVKNVTVQTEVVIFPTLNWDLTENVP     98
                     |....:....||||||||:.|||.||::..:..||:|.|.|||...|:||
RBAM_018590__     46 NHETGNHEFTLGSDGAGIVTEIGHGVRSHLLHAEVIINPVLNWKTVEDVP     95

BSNT_03052___     99 PVPEILGGPSDGTLAEYVIIPSQNAIKKPAYLSWEEAGVLPLSALTAYRA    148
                     .||:|||||||||.:.|||:|.:||:.||.:|:|||||||||||||||||
RBAM_018590__     96 AVPDILGGPSDGTFSPYVIVPEENAVLKPEHLTWEEAGVLPLSALTAYRA    145

BSNT_03052___    149 LFTKGQLKKGEHLLIPGIGSGVATYALFMAKAIGATVSVTSRSEEKRKKA    198
                     |||||||||||||::||||||||||||.||||||||||||||||.|::.|
RBAM_018590__    146 LFTKGQLKKGEHLILPGIGSGVATYALLMAKAIGATVSVTSRSENKKQTA    195

BSNT_03052___    199 LKLGADYAFDSYSNWDEQLQGKKADVVLDSIGPALFSEYFRHVKPNGRIV    248
                     |..|||.|.|||.:|:|.|.|:|||::||.:|||||..|...:|||||||
RBAM_018590__    196 LSYGADRAIDSYGDWNEALNGEKADIILDGVGPALFQHYLDIMKPNGRIV    245

BSNT_03052___    249 SFGASSGDNLSFPVRSLFFPQVNVLGTSMGSGEEFQAMLAFIDKHKLRPV    298
                     :|||||||.|.||:|||||||:::|||||||.|||..||..:::..:||:
RBAM_018590__    246 TFGASSGDQLGFPIRSLFFPQIHILGTSMGSNEEFADMLELVNRCGIRPI    295

BSNT_03052___    299 IDRIYPLEKACEAYKRMQEGRQFGNIGIVME-    329
                     |||:|||.:|..|:.||:|||||||||..:: 
RBAM_018590__    296 IDRMYPLSEAAAAFNRMREGRQFGNIGFRLDV    327


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