Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03049 and RBAM_018530

See DNA alignment / Visit BSNT_03049 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:54
# Commandline: needle
#    -asequence pep-align/BSNT_03049___yoeD.1.9828.seq
#    -bsequence pep-align/RBAM_018530___yoeD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03049___yoeD-RBAM_018530___yoeD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03049___yoeD-RBAM_018530___yoeD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03049___yoeD
# 2: RBAM_018530___yoeD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 76
# Identity:      56/76 (73.7%)
# Similarity:    68/76 (89.5%)
# Gaps:           0/76 ( 0.0%)
# Score: 305.0
# 
#
#=======================================

BSNT_03049___      1 MYLTIEETAEYTNLSEDYIKSLVLEGKIRAVHDGEQFLIYKEQFKTHLEQ     50
                     |||||:||||:|:|.|:|:.:|||..||||||||:|:||.||||:|||||
RBAM_018530__      1 MYLTIKETAEFTSLPEEYVHNLVLTNKIRAVHDGQQYLINKEQFQTHLEQ     50

BSNT_03049___     51 LENYKALVQEILNEPIPEDIDVKDED     76
                     ||.||.::||.||||:||||||||||
RBAM_018530__     51 LEKYKEMIQEFLNEPLPEDIDVKDED     76


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