Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03049 and RBAM_018530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:54
# Commandline: needle
# -asequence dna-align/BSNT_03049___yoeD.1.9828.seq
# -bsequence dna-align/RBAM_018530___yoeD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03049___yoeD-RBAM_018530___yoeD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03049___yoeD-RBAM_018530___yoeD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03049___yoeD
# 2: RBAM_018530___yoeD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 235
# Identity: 176/235 (74.9%)
# Similarity: 176/235 (74.9%)
# Gaps: 8/235 ( 3.4%)
# Score: 634.0
#
#
#=======================================
BSNT_03049___ 1 ATGTATTTAACGATTGAAGAAACAGCAGAATATACAAATCTTTCAGAGGA 50
||||||||||||||..||||.|||||.||.|.|||.|.||||.|.||.||
RBAM_018530__ 1 ATGTATTTAACGATCAAAGAGACAGCTGAGTTTACCAGTCTTCCTGAAGA 50
BSNT_03049___ 51 TTATAT-TAAAAGCTTGGTGCT---CGAAGGGAAAATCAGAGCCGTTCAT 96
.|||.| .|.||.||||.| | |||| .|||||.||.|||||.|||
RBAM_018530__ 51 ATATGTGCACAATCTTGTT--TTGACGAA--TAAAATAAGGGCCGTCCAT 96
BSNT_03049___ 97 GACGGGGAGCAATTTTTGATTTATAAGGAACAGTTCAAAACGCATCTCGA 146
|||||..||||||.|||.||..|.||||||||.||..||||.||||||||
RBAM_018530__ 97 GACGGACAGCAATATTTAATCAACAAGGAACAATTTCAAACCCATCTCGA 146
BSNT_03049___ 147 ACAGCTGGAGAATTACAAAGCACTGGTGCAGGAAATATTAAATGAACCGA 196
|||||||||.||.||.||.|.|.||.|.||.||..|.||||||||.|||.
RBAM_018530__ 147 ACAGCTGGAAAAATATAAGGAAATGATTCAAGAGTTTTTAAATGAGCCGC 196
BSNT_03049___ 197 TCCCGGAAGATATTGATGTAAAGGATGAGGATTAG 231
|.||.|||||.|||||||||||.|||||.||||||
RBAM_018530__ 197 TTCCTGAAGACATTGATGTAAAAGATGAAGATTAG 231
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