Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03048 and RBAM_018520

See DNA alignment / Visit BSNT_03048 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:54
# Commandline: needle
#    -asequence pep-align/BSNT_03048.1.9828.seq
#    -bsequence pep-align/RBAM_018520.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03048-RBAM_018520.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03048-RBAM_018520.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03048
# 2: RBAM_018520
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity:     162/181 (89.5%)
# Similarity:   175/181 (96.7%)
# Gaps:           0/181 ( 0.0%)
# Score: 846.0
# 
#
#=======================================

BSNT_03048         1 MHIVQPIRSLEKIQEVKQYLLNKNKRDYFLFIFGINSALRISDILPLQVK     50
                     ||||||||||||||||||||:.|:.|||||||||:||||||||:|||:|:
RBAM_018520        1 MHIVQPIRSLEKIQEVKQYLMKKSDRDYFLFIFGMNSALRISDVLPLRVR     50

BSNT_03048        51 DVQNKDHLWATESKTKKKRKILILESLKQEIYEYTKDMKENEYLFKSVRT    100
                     ||:||||:|||||||:||||||||||||.:||.|||||||::|||||.||
RBAM_018520       51 DVRNKDHVWATESKTRKKRKILILESLKADIYAYTKDMKEDDYLFKSKRT    100

BSNT_03048       101 RKPISRIQAYRILREAAAACGLEEIGTHTLRKTFGYHFYQRTKDIAELQR    150
                     .||||||||||||:||||||||||||||||||||||||||||||||||||
RBAM_018520      101 NKPISRIQAYRILKEAAAACGLEEIGTHTLRKTFGYHFYQRTKDIAELQR    150

BSNT_03048       151 ILNHSSPSITMRYIGIDEDTTRAAYKVFGGL    181
                     |||||||||||||||||||||||||||||||
RBAM_018520      151 ILNHSSPSITMRYIGIDEDTTRAAYKVFGGL    181


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.