Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03048 and RBAM_018520
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:54
# Commandline: needle
# -asequence dna-align/BSNT_03048.1.9828.seq
# -bsequence dna-align/RBAM_018520.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03048-RBAM_018520.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03048-RBAM_018520.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03048
# 2: RBAM_018520
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 547
# Identity: 426/547 (77.9%)
# Similarity: 426/547 (77.9%)
# Gaps: 2/547 ( 0.4%)
# Score: 1634.0
#
#
#=======================================
BSNT_03048 1 ATGCATATTGTACAGCCGATTCGCAGTCTAGAGAAAATCCAAGAAGTCAA 50
||||||||.|||||||||||.||.|||.|.|||||.|||||.||||||||
RBAM_018520 1 ATGCATATCGTACAGCCGATCCGAAGTTTGGAGAAGATCCAGGAAGTCAA 50
BSNT_03048 51 ACAGTATTTGCTTAACAAAAACAAGCGGGATTATTTTCTGTTTATTTTCG 100
|||||||||..|.||.||||...|.||.|||||||||.|.||||||||.|
RBAM_018520 51 ACAGTATTTAATGAAGAAAAGTGATCGTGATTATTTTTTATTTATTTTTG 100
BSNT_03048 101 GCATCAACAGCGCGCTCCGCATTTCTGATATTCTGCCGCTGCAAGTGAAG 150
||||.||||||||.||.||.|||||||||.||||||||||.|..||||.|
RBAM_018520 101 GCATGAACAGCGCACTGCGGATTTCTGATGTTCTGCCGCTTCGCGTGAGG 150
BSNT_03048 151 GACGTTCA-AAATAAAGATCATTTATGGGCGACTGAAAGCAAAACGAAAA 199
||.| ||| .||.|||||.|||.|.|||||.||.|||||||||||||.||
RBAM_018520 151 GATG-TCAGGAACAAAGACCATGTGTGGGCAACCGAAAGCAAAACGAGAA 199
BSNT_03048 200 AGAAAAGAAAGATTCTTATTTTAGAATCGCTGAAACAGGAAATATACGAG 249
||||||||||.|||||.||..|.||.||..|.||....||.|||||||..
RBAM_018520 200 AGAAAAGAAAAATTCTGATACTGGAGTCTTTAAAGGCCGACATATACGCT 249
BSNT_03048 250 TATACGAAAGACATGAAGGAAAACGAATATCTTTTTAAATCAGTGCGCAC 299
|||||.|||||||||||.||..|.||.|||.|.||||||||....||.||
RBAM_018520 250 TATACAAAAGACATGAAAGAGGATGACTATTTGTTTAAATCGAAACGGAC 299
BSNT_03048 300 CAGGAAGCCGATTTCCCGCATTCAGGCCTACAGAATTTTAAGAGAGGCCG 349
.|..|||||.||.|||||.||||||||.||||||||.||||..||.||.|
RBAM_018520 300 GAATAAGCCCATATCCCGGATTCAGGCATACAGAATATTAAAGGAAGCGG 349
BSNT_03048 350 CTGCGGCGTGCGGACTTGAAGAGATAGGGACGCATACACTCCGGAAAACG 399
||||.||.|||||..|.||.||.||.||.|||||.||.||..|.||.|||
RBAM_018520 350 CTGCCGCTTGCGGGTTGGAGGAAATCGGAACGCACACGCTTAGAAAGACG 399
BSNT_03048 400 TTTGGCTATCATTTTTATCAGCGAACGAAAGACATCGCCGAGCTGCAGAG 449
||.||.|||||||||||||||.|.||.||||||||.||.||.||||||||
RBAM_018520 400 TTCGGGTATCATTTTTATCAGAGGACAAAAGACATTGCTGAACTGCAGAG 449
BSNT_03048 450 AATACTGAATCATTCATCACCATCAATTACAATGCGGTATATCGGTATTG 499
.||..|.||||||||.||.||.||.|||||||||||.||||||||.||.|
RBAM_018520 450 GATTTTAAATCATTCTTCTCCGTCGATTACAATGCGTTATATCGGAATAG 499
BSNT_03048 500 ATGAAGATACGACAAGAGCCGCATATAAGGTTTTTGGAGGGCTTTAA 546
|||||||||||||.||||||||.|||||.||.||.||||||||.||.
RBAM_018520 500 ATGAAGATACGACGAGAGCCGCCTATAAAGTGTTCGGAGGGCTGTAG 546
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