Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03042 and RBAM_018500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:54
# Commandline: needle
# -asequence pep-align/BSNT_03042___yoeB.1.9828.seq
# -bsequence pep-align/RBAM_018500___yoeB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03042___yoeB-RBAM_018500___yoeB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03042___yoeB-RBAM_018500___yoeB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03042___yoeB
# 2: RBAM_018500___yoeB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity: 139/181 (76.8%)
# Similarity: 145/181 (80.1%)
# Gaps: 1/181 ( 0.6%)
# Score: 692.0
#
#
#=======================================
BSNT_03042___ 1 MKKCLLFLTTIALILSLSTNAFAKNTSGDLSQKQALQLALSAREHFWNTM 50
|||.|||||||.|||||.|.|.|||....|:|||||||||||||||||||
RBAM_018500__ 1 MKKWLLFLTTITLILSLGTAATAKNAPNGLTQKQALQLALSAREHFWNTM 50
BSNT_03042___ 51 SGHNPKVKKAVCPSGTFEYQNLQYVYMCSDLGTKAKAVNYLTPIFTKTAI 100
||...| ..|.|.|..|||||||||:||.|||||||||.||||.|||.||
RBAM_018500__ 51 SGGALK-SNANCTSEPFEYQNLQYVFMCKDLGTKAKAVKYLTPAFTKQAI 99
BSNT_03042___ 101 EKGFKDYHFTVSKGKLAVPIGDGDNLLNWKKSTAKLVSKKGGTITYEFTV 150
:||.|||||||..||||||:|||||||||||:...|:||||...||.|||
RBAM_018500__ 100 DKGLKDYHFTVKDGKLAVPVGDGDNLLNWKKAKMTLLSKKGSVQTYRFTV 149
BSNT_03042___ 151 PTLDGSPSAKRKVTFVKENKKWKVNQFDAVI 181
|||||||||||.|||||||..||||||||||
RBAM_018500__ 150 PTLDGSPSAKRNVTFVKENNVWKVNQFDAVI 180
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