Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03039 and RBAM_018480

See DNA alignment / Visit BSNT_03039 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:54
# Commandline: needle
#    -asequence pep-align/BSNT_03039___yoxA.1.9828.seq
#    -bsequence pep-align/RBAM_018480___yoxA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03039___yoxA-RBAM_018480___yoxA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03039___yoxA-RBAM_018480___yoxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03039___yoxA
# 2: RBAM_018480___yoxA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 325
# Identity:     194/325 (59.7%)
# Similarity:   242/325 (74.5%)
# Gaps:           3/325 ( 0.9%)
# Score: 1061.0
# 
#
#=======================================

BSNT_03039___      1 MANFIEKMTYLGTPAIKAGNEHLEMIVVPEWGSNVISLVDKTTNVQLLRE     50
                       ..||..||||..||||..:..|.|:|||||||||||.||.|.::||||
RBAM_018480__      1 --MTIEHTTYLGVSAIKAETDQAECIIVPEWGSNVISLRDKRTGMRLLRE     48

BSNT_03039___     51 PETAESFHDTPTLYGIPILFPPNRISDGTFSFRGRTYHFDINEKDKHNHL    100
                     |||||.|...|.|||||:|||||||:||||.|.||.|.|:|||:|||||:
RBAM_018480__     49 PETAEQFRAKPMLYGIPVLFPPNRITDGTFRFDGRAYQFEINEEDKHNHI     98

BSNT_03039___    101 HGFLYHEKWNVVTTKQTDEEVIVETEIDLSELPHVQKQFPHHAVVRMTYT    150
                     ||||:::.|.....|:..:.:.||||||||::|.|.|||||..|||||||
RBAM_018480__     99 HGFLHNQHWKAAAAKEEGDGMTVETEIDLSKIPRVHKQFPHDVVVRMTYT    148

BSNT_03039___    151 IKENTLFKHATVMNKGKEAFPWGIGYHTTFIFPAESSLFSLTADQQWELD    200
                     :|:|...:.|.::|||.||||||:|||:||:|..|.|...||||:.|||:
RBAM_018480__    149 LKDNVFTQRALIINKGTEAFPWGLGYHSTFVFNEERSRLFLTADRMWELN    198

BSNT_03039___    201 ERLLPTGKLMGVPNKEALHEGMDLRHKQLDDVFLSSYQKRGGENQAVIYH    250
                     ||.:|||:|:.||:|||...||.|::||.||||||| .:.||.|:|||||
RBAM_018480__    199 ERFVPTGRLLDVPDKEAFRHGMSLKNKQFDDVFLSS-GRNGGNNEAVIYH    247

BSNT_03039___    251 QHAHISIIYKADEQFKHWVVYNADGKQGYLCPEPYTWVTNAVNLDLPSSL    300
                     ....:|::|:||..||||||||.|||||::..||||.||:|.||:.|:||
RBAM_018480__    248 PDEQLSVLYQADTSFKHWVVYNGDGKQGFVSLEPYTSVTDAFNLNQPASL    297

BSNT_03039___    301 TGFQVLEPGEETTAKSSITIELNHQ    325
                     ||.|:|:||||..|.|.|||..:.:
RBAM_018480__    298 TGLQILKPGEEAAASSRITILHDEE    322


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