Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03026 and RBAM_018410

See DNA alignment / Visit BSNT_03026 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:54
# Commandline: needle
#    -asequence pep-align/BSNT_03026___yngL.1.9828.seq
#    -bsequence pep-align/RBAM_018410___yngL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03026___yngL-RBAM_018410___yngL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03026___yngL-RBAM_018410___yngL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03026___yngL
# 2: RBAM_018410___yngL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity:      91/147 (61.9%)
# Similarity:   109/147 (74.1%)
# Gaps:          21/147 (14.3%)
# Score: 470.5
# 
#
#=======================================

BSNT_03026___      1 -----------------MDHLSFLTFIMLILASYRLTHLIVFDKITEFIR     33
                                      |.:||:||::|:|||||||||||||||||||||
RBAM_018410__      1 MTEGKIGESNQFFGGFDMTNLSWLTYVMIILASYRLTHLIVFDKITEFIR     50

BSNT_03026___     34 KPFMKKKRIVDQNGHVDEKSVPASNFGYMLNCYWCAGVWCAILIGLGYLF     83
                     |||:|:::.|||||...:|.||:|.|||||.||||||||||||||:.||.
RBAM_018410__     51 KPFIKQEKTVDQNGRAVQKKVPSSAFGYMLQCYWCAGVWCAILIGICYLV    100

BSNT_03026___     84 LPRIAIPLIFILAIAGAQAILETAVGVGVKLIDVLKSLQTMINDKKS    130
                     .||.|.|:||||:||||||||||.||||.|:||||.:::    .|||
RBAM_018410__    101 WPRYAHPVIFILSIAGAQAILETCVGVGTKVIDVLAAMK----HKKS    143


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.