Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03026 and RBAM_018410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:54
# Commandline: needle
# -asequence dna-align/BSNT_03026___yngL.1.9828.seq
# -bsequence dna-align/RBAM_018410___yngL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03026___yngL-RBAM_018410___yngL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03026___yngL-RBAM_018410___yngL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03026___yngL
# 2: RBAM_018410___yngL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 462
# Identity: 283/462 (61.3%)
# Similarity: 283/462 (61.3%)
# Gaps: 99/462 (21.4%)
# Score: 890.5
#
#
#=======================================
BSNT_03026___ 0 -------------------------------------------------- 0
RBAM_018410__ 1 ATGACAGAGGGCAAGATAGGGGAATCAAACCAGTTTTTTGGAGGCTTTGA 50
BSNT_03026___ 1 -ATG--GATCATTTATCTTTTCTTACGTTTATCATGCTGATTCTAGCCAG 47
||| || |..||||||..|||||||.|.|.|||.|.|||||.|||||
RBAM_018410__ 51 CATGACGA--ACCTATCTTGGCTTACGTATGTAATGATCATTCTTGCCAG 98
BSNT_03026___ 48 TTACAGGCTGACACATTTGATTGTATTCGACAAAATCACAGAATTTATCC 97
.|||.|||||||.||||||||.|||||.||.||.||.||.|||||.||..
RBAM_018410__ 99 CTACCGGCTGACCCATTTGATCGTATTTGATAAGATTACGGAATTCATAA 148
BSNT_03026___ 98 GAAAACCTTTTATGAAA--AAGAAAAGGATTGTTGATCAAAACGGGCATG 145
|||||||.||||| ||| ||||||| .|..||.|||||||||||||..|
RBAM_018410__ 149 GAAAACCCTTTAT-AAAGCAAGAAAA-AACCGTCGATCAAAACGGGCGCG 196
BSNT_03026___ 146 TAGATGAAAAAAGCGTGCCGGCTTCTAACTTTGGATACATGCT-CAATTG 194
..|...||||||..||.||..|.||....||.||.||.||||| ||| ||
RBAM_018410__ 197 CCGTCCAAAAAAAAGTCCCTTCCTCCGCATTCGGTTATATGCTGCAA-TG 245
BSNT_03026___ 195 CTACTGGTGTGCCGGTGTTTGGTGTGCCATTTTGATCGG--------ACT 236
.||.||||||||.||.||.|||||.|||||.|||||||| |||
RBAM_018410__ 246 TTATTGGTGTGCGGGCGTCTGGTGCGCCATATTGATCGGCATCTGCTACT 295
BSNT_03026___ 237 TGGCTATCTTTTTTTGCCTCG-TATTGCA-ATACCGCTGATCTTTATTTT 284
||| |.|.|||.|| || |||| || |||.|.||.||.|||||
RBAM_018410__ 296 TGG--------TCTGGCCCCGCTA-TGCACAT-CCGGTTATTTTCATTTT 335
BSNT_03026___ 285 AGCTATTGCCGGAGCACAAGCGATCCTTGAAACGGCTGTCGGTGTCGG-- 332
..|.||.||||||||.||.||.||.|||||||||..||||||.|||||
RBAM_018410__ 336 GTCCATCGCCGGAGCGCAGGCCATTCTTGAAACGTGTGTCGGCGTCGGAA 385
BSNT_03026___ 333 CGTAAAACTTATTGACGTGTTAAAAAGTCT-GCAAACCATGATTAATGAT 381
|| ||..|.||||||||| || || ..||||| ||..||
RBAM_018410__ 386 CG--AAGGTCATTGACGTG---------CTCGC-CGCCATG---AAACAT 420
BSNT_03026___ 382 AAAAAGTCCTAA 393
||||||||||.|
RBAM_018410__ 421 AAAAAGTCCTGA 432
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