Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03024 and RBAM_018400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:53
# Commandline: needle
# -asequence pep-align/BSNT_03024___yngK.1.9828.seq
# -bsequence pep-align/RBAM_018400___yngK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03024___yngK-RBAM_018400___yngK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03024___yngK-RBAM_018400___yngK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03024___yngK
# 2: RBAM_018400___yngK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 514
# Identity: 373/514 (72.6%)
# Similarity: 419/514 (81.5%)
# Gaps: 6/514 ( 1.2%)
# Score: 1972.5
#
#
#=======================================
BSNT_03024___ 1 MKVCQKSIVRFL-VSLIIGTFVISVPFMAN-AQSDRELRAVWIASVLNID 48
||.|:.|::.|| |.|..|.|..|....|: .|..||:||||||||.|||
RBAM_018400__ 1 MKSCRFSMIWFLAVVLTAGIFTFSASAQASGTQPKREMRAVWIASVTNID 50
BSNT_03024___ 49 WPSKKGLSVKEQKQEYIKLLDDVQKMGMNAVIVQIKPTADAFYPSAYGPW 98
||||||||.:|||:||.|||||||:||||||||||||.|||||||.||||
RBAM_018400__ 51 WPSKKGLSPEEQKREYSKLLDDVQEMGMNAVIVQIKPAADAFYPSDYGPW 100
BSNT_03024___ 99 SEYLTGVQGKDPGYDPLAFMIEETHKRNLEFHAWFNPYRITMNHTDLNKL 148
||||||.|||:||||||||::||||||||||||||||||||||||:||.|
RBAM_018400__ 101 SEYLTGTQGKNPGYDPLAFLVEETHKRNLEFHAWFNPYRITMNHTNLNAL 150
BSNT_03024___ 149 SESHPARKHPDWVAAYGNQLYYHPGIPETRDFIVKGIEEVVKHYDIDAVH 198
|:.||||.|||||||||.||||:|||||.|.||..||:|||..|||||||
RBAM_018400__ 151 SDDHPARSHPDWVAAYGKQLYYNPGIPEVRQFITDGIKEVVSRYDIDAVH 200
BSNT_03024___ 199 MDDYFYPYKIAGQEFPDQAQYEQYGKGAFSNIDDWRRDNVNQLVKQINQT 248
|||||||||||||||||||:||:|||..|::||||||||||:|||:||||
RBAM_018400__ 201 MDDYFYPYKIAGQEFPDQAEYERYGKAHFASIDDWRRDNVNRLVKEINQT 250
BSNT_03024___ 249 IKAEKPYVKFGISPFGVWRNAADDPTGSNTKAGVRNYDDLYADTRHWIQE 298
||.|||||||||||||||||||||||||.|.||||||||||||||.|||:
RBAM_018400__ 251 IKREKPYVKFGISPFGVWRNAADDPTGSETAAGVRNYDDLYADTREWIQK 300
BSNT_03024___ 299 GDIDYIAPQIYWSIGFNAAAYDVLADWWSNEVKNRPVHLYIGQAAYKINN 348
|.||||||||||||||.|||||||||||..||.|||||||||||||||||
RBAM_018400__ 301 GYIDYIAPQIYWSIGFKAAAYDVLADWWGKEVNNRPVHLYIGQAAYKINN 350
BSNT_03024___ 349 NFDPPWSDPEEYVRQITLNRQLELVKGSMHFSLKDLNKNPLGIKDRLIAD 398
|.||.|:||.||..||||||....:|||:||||||||:|||.:|:|||.|
RBAM_018400__ 351 NADPAWADPGEYGGQITLNRGSAWIKGSLHFSLKDLNRNPLDVKNRLIKD 400
BSNT_03024___ 399 LYSKPALVPQMPWLDNTAPKKPKLTKVTEDKNGNLLQIKDHPSNQKTKET 448
:||:||::|:||||.::|.|||.:.:..::.:|:.|.|:|..|| .|:|
RBAM_018400__ 401 MYSQPAIIPEMPWLGHSALKKPSVKRAEKNASGHTLYIEDAKSN--GKKT 448
BSNT_03024___ 449 AYYAIYRAEGKKQNTLLATQRKTHEQ-QTFLDNTADPNKKYTYYVTSADR 497
|||||||||..||..|:.|.|||..: |||.|.........||.|||.||
RBAM_018400__ 449 AYYAIYRAEKGKQPYLVDTVRKTSSRTQTFSDTDTRAKGACTYIVTSVDR 498
BSNT_03024___ 498 LHNESKAS-KRTTK 510
||:||..| |||.|
RBAM_018400__ 499 LHHESHPSAKRTVK 512
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