Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03015 and RBAM_018340

See DNA alignment / Visit BSNT_03015 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:53
# Commandline: needle
#    -asequence pep-align/BSNT_03015___yngF.1.9828.seq
#    -bsequence pep-align/RBAM_018340___yngF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03015___yngF-RBAM_018340___yngF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03015___yngF-RBAM_018340___yngF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03015___yngF
# 2: RBAM_018340___yngF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     172/260 (66.2%)
# Similarity:   207/260 (79.6%)
# Gaps:           1/260 ( 0.4%)
# Score: 845.0
# 
#
#=======================================

BSNT_03015___      1 MGDSILFTVKNEHMALITFNRPQAANALSAEMLRNLQMILQEIEFNSNIR     50
                     |||.:|::|..|.:.|||.|||.|||:||:||:.:||.::::|:.:.:||
RBAM_018340__      1 MGDCVLYSVCQETIGLITLNRPHAANSLSSEMIDHLQRVIEDIKNSPSIR     50

BSNT_03015___     51 CVILTGTGEKAFCAGADLKERIKLKEDQVLESVSLIQRTAALLDALPQPV    100
                     |||||||| ..||||||||||..:..:||.:||..|..|||.::||||||
RBAM_018340__     51 CVILTGTG-NTFCAGADLKERAGMNHEQVKQSVRRIGETAASIEALPQPV     99

BSNT_03015___    101 IAAINGSALGGGLELALACDLRIAAESAVLGLPETGLAIIPGAGGTQRLP    150
                     |||:||:|:|||||||||||:|.|...|.|||||||||||||||||||||
RBAM_018340__    100 IAALNGTAVGGGLELALACDIRTAVSRAGLGLPETGLAIIPGAGGTQRLP    149

BSNT_03015___    151 RLIGRGKAKEFIYTGRRVTAHEAKEIGLVEHVTAPCDLMPKAEELAAAIS    200
                     ||||.|.|||.||||||::|.|.|::.|:|||....:||.||:.||..|:
RBAM_018340__    150 RLIGPGAAKELIYTGRRLSAEEGKDMKLIEHVCEADELMEKAKALAGRIA    199

BSNT_03015___    201 ANGPIAVRQAKFAINKGLETDLATGLAIEQKAYEQTIPTKDRREGLQAFQ    250
                     |||||||||||.||||||||||.|||.||:|||||.|||.||.|||:||:
RBAM_018340__    200 ANGPIAVRQAKSAINKGLETDLNTGLEIERKAYEQVIPTLDREEGLRAFK    249

BSNT_03015___    251 EKRRAVYKGI    260
                     |||...|||.
RBAM_018340__    250 EKRPPEYKGK    259


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