Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03011 and RBAM_018320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:52
# Commandline: needle
# -asequence pep-align/BSNT_03011___yngC.1.9828.seq
# -bsequence pep-align/RBAM_018320___yngC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03011___yngC-RBAM_018320___yngC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03011___yngC-RBAM_018320___yngC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03011___yngC
# 2: RBAM_018320___yngC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 199
# Identity: 155/199 (77.9%)
# Similarity: 179/199 (89.9%)
# Gaps: 4/199 ( 2.0%)
# Score: 840.0
#
#
#=======================================
BSNT_03011___ 1 MGSLISEILTWLTNMGYAGIAIGLMIEIIPSEIVLAYGGYMVSEGTIGFI 50
||:.|||||:|||:|||.|||:|||||||||||||||||||||||||.||
RBAM_018320__ 1 MGNFISEILSWLTSMGYLGIALGLMIEIIPSEIVLAYGGYMVSEGTISFI 50
BSNT_03011___ 51 GAIIAGVIGGTIAQIFIYWIGRYGGRPFLDKYGKYLLIKKHHIDMSENWF 100
|||:||||||||||.|||||.||||||||||||||||:||||:|::||||
RBAM_018320__ 51 GAIVAGVIGGTIAQCFIYWIARYGGRPFLDKYGKYLLLKKHHVDVAENWF 100
BSNT_03011___ 101 QKYGAGVVFSARFIPVVRHAISIPAGIARMPFLKFVVLTVLAIIPWSILF 150
::||||||||||||||||||||||||:|:||..|||:||.|||||||::|
RBAM_018320__ 101 RRYGAGVVFSARFIPVVRHAISIPAGLAKMPLSKFVILTTLAIIPWSVIF 150
BSNT_03011___ 151 VYLGIQLGSQWDDVENIAGTYTTPIMILAVVVIALYFVIKK-RTAIFKR 198
||||.|||.||.||::.||.|||||:|||:|.|.:|||:|| |:.:
RBAM_018320__ 151 VYLGYQLGGQWKDVDSYAGMYTTPIIILALVFIVVYFVVKKMRSRL--- 196
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