Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03010 and RBAM_018310

See DNA alignment / Visit BSNT_03010 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:52
# Commandline: needle
#    -asequence pep-align/BSNT_03010___yngB.1.9828.seq
#    -bsequence pep-align/RBAM_018310___yngB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03010___yngB-RBAM_018310___yngB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03010___yngB-RBAM_018310___yngB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03010___yngB
# 2: RBAM_018310___yngB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     245/297 (82.5%)
# Similarity:   269/297 (90.6%)
# Gaps:           0/297 ( 0.0%)
# Score: 1258.0
# 
#
#=======================================

BSNT_03010___      1 MRKKVRKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPAIQYIVEEAAESG     50
                     |||||||||||||||||||||||||||||||||||||||||||||||.:|
RBAM_018310__      1 MRKKVRKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPAIQYIVEEAAAAG     50

BSNT_03010___     51 IEDILIITGRNKRSIEDHFDRSAELEFNLREKGKTETLKEMQQIADLANI    100
                     |||||||||||||||||||||||||||||.||||||||||||:|||||||
RBAM_018310__     51 IEDILIITGRNKRSIEDHFDRSAELEFNLEEKGKTETLKEMQRIADLANI    100

BSNT_03010___    101 HYIRQKEPLGLGHAVLCAEHFIGDEPFAVLLGDDIMVSETPALRQLMDVY    150
                     ||:|||||||||||||||||||||||||||||||||||:||||.||:|||
RBAM_018310__    101 HYLRQKEPLGLGHAVLCAEHFIGDEPFAVLLGDDIMVSDTPALSQLIDVY    150

BSNT_03010___    151 DVYGTEVVGVQSVLPEDVSKYGIINTSGSQGHVYEVNDLVEKPSPEEAPS    200
                     :.:|||.||||.|.|.||||||||.|....||||:|.||:|||:.|:|||
RBAM_018310__    151 NQHGTETVGVQPVDPADVSKYGIIQTGRQGGHVYQVEDLIEKPAVEKAPS    200

BSNT_03010___    201 EIAVMGRYVLNSSIFSVLKTIGRGAGNEIQLTDALREVCRKEPIHARLLE    250
                     .|||||||:|..:||..|||||||||||||||||||||||...|:||.||
RBAM_018310__    201 HIAVMGRYILTPAIFKTLKTIGRGAGNEIQLTDALREVCRTRSIYARELE    250

BSNT_03010___    251 GNRYDIGDKLGCFKASTEIGLMRSEMRSQLLAYLEDVIKRETKEMLR    297
                     |:|:|||||.|||||.|||||:|.|||.:||||||:|:|||::|::|
RBAM_018310__    251 GSRFDIGDKFGCFKAGTEIGLLREEMRPKLLAYLEEVLKRESEEIVR    297


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