Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03010 and RBAM_018310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:52
# Commandline: needle
# -asequence dna-align/BSNT_03010___yngB.1.9828.seq
# -bsequence dna-align/RBAM_018310___yngB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03010___yngB-RBAM_018310___yngB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03010___yngB-RBAM_018310___yngB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03010___yngB
# 2: RBAM_018310___yngB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 914
# Identity: 721/914 (78.9%)
# Similarity: 721/914 (78.9%)
# Gaps: 40/914 ( 4.4%)
# Score: 2878.0
#
#
#=======================================
BSNT_03010___ 1 ATGAGAAAAAAAGTGAGAAAAGCAGTTATTCCCGCAGCGGGTTTAGGAAC 50
|||||||||||||||||||||||.||.|||||||||||.|||||||||||
RBAM_018310__ 1 ATGAGAAAAAAAGTGAGAAAAGCGGTCATTCCCGCAGCAGGTTTAGGAAC 50
BSNT_03010___ 51 GAGATTTCTGCCGGCGACAAAGGCGCAGCCTAAAGAAATGCTCCCAATCG 100
||||||||||||||||||||||||||||||||||||||||||.||.||.|
RBAM_018310__ 51 GAGATTTCTGCCGGCGACAAAGGCGCAGCCTAAAGAAATGCTGCCGATTG 100
BSNT_03010___ 101 TCGACAAACCAGCAATCCAATATATTGTAGAAGAGGCCGCAGAGTCAGGA 150
||||||||||.||.||||||||||||||.|||||||||||||.|.|||||
RBAM_018310__ 101 TCGACAAACCGGCCATCCAATATATTGTCGAAGAGGCCGCAGCGGCAGGA 150
BSNT_03010___ 151 ATTGAAGATATACTGATTATTACAGGGAGAAACAAACGCTCGATTGAAGA 200
||||||||||||.|||||||||||||||||||||||||||||||||||||
RBAM_018310__ 151 ATTGAAGATATATTGATTATTACAGGGAGAAACAAACGCTCGATTGAAGA 200
BSNT_03010___ 201 TCATTTTGATCGGTCGGCGGAATTGGAATTCAATCTCCGGGAAAAAGGCA 250
|||||||||.||||||||||||||||||||||||||...|||||||||||
RBAM_018310__ 201 TCATTTTGACCGGTCGGCGGAATTGGAATTCAATCTTGAGGAAAAAGGCA 250
BSNT_03010___ 251 AGACGGAGACACTTAAGGAAATGCAGCAGATTGCCGATTTGGCCAACATT 300
||||||||||.||.|||||.|||||||.||||||||||||||||||.|||
RBAM_018310__ 251 AGACGGAGACGCTGAAGGAGATGCAGCGGATTGCCGATTTGGCCAATATT 300
BSNT_03010___ 301 CATTACATCCGCCAGAAAGAACCGCTCGGATTAGGCCATGCGGTGCTGTG 350
||||||.||||.||||||||||||||||||.||||.||||||||||||||
RBAM_018310__ 301 CATTACCTCCGTCAGAAAGAACCGCTCGGACTAGGACATGCGGTGCTGTG 350
BSNT_03010___ 351 TGCGGAGCATTTTATCGGAGATGAGCCTTTTGCTGTTCTCTTAGGTGATG 400
|||||||||||||||||||||||||||||||||.||||||||||||||||
RBAM_018310__ 351 TGCGGAGCATTTTATCGGAGATGAGCCTTTTGCCGTTCTCTTAGGTGATG 400
BSNT_03010___ 401 ATATTATGGTGTCTGAAACACCGGCTCTTCGGCAATTAATGGATGTATAT 450
||||||||||.|||||.||.||.||||||...||..|.||.||.||.|||
RBAM_018310__ 401 ATATTATGGTATCTGACACTCCCGCTCTTTCACAGCTCATAGACGTCTAT 450
BSNT_03010___ 451 GACGTTTATGGCACAGAGGTTGTCGGTGTACAGTCAGTTCTCCCTGAGGA 500
.||....|.||||||||....|||||.||||||.|.||....||||..||
RBAM_018310__ 451 AACCAACACGGCACAGAAACGGTCGGCGTACAGCCCGTCGATCCTGCTGA 500
BSNT_03010___ 501 TGTCAGCAAATATGGTATTATAAATACATCAGGGTCTCAAGGG----CAT 546
||||||||||||||||||||||.|.|| |||.|...|||| |||
RBAM_018310__ 501 TGTCAGCAAATATGGTATTATACAGAC----GGGGCGGCAGGGCGGTCAT 546
BSNT_03010___ 547 GTATACGAAGTGAACGATTTAGTGGAAAAGCCTTCTCCTGAAGAAGCACC 596
||.|||.|.||..|.|||.|..|.||.||.||..||..||||.|.||.||
RBAM_018310__ 547 GTGTACCAGGTTGAGGATCTGATTGAGAAACCGGCTGTTGAAAAGGCGCC 596
BSNT_03010___ 597 TTCGGAAATCGCAGTAATGGGACGTTATGTGCTGAATT-----CTTCGAT 641
.||..|.||.||.||.|||||.||.||..| ||| ||.|.||
RBAM_018310__ 597 CTCTCATATTGCCGTGATGGGCCGCTACAT-----ATTAACCCCTGCTAT 641
BSNT_03010___ 642 CTTCTCCGTTT--------TGAAGACAATTGGCAGAGGCGCGGGCAACGA 683
||| |||||||.||.||.|||||||||||||||||
RBAM_018310__ 642 --------TTTTAAAACGCTGAAGACGATCGGAAGAGGCGCGGGCAACGA 683
BSNT_03010___ 684 AATTCAGCTGACAGATGCGCTTCGTGAGGTTTGCCGTA--AGGAGCCGAT 731
|||.||..|||||||.|||||.||.||.||.|||||.| .|.||| ||
RBAM_018310__ 684 AATCCAATTGACAGACGCGCTGCGCGAAGTGTGCCGCACCCGAAGC--AT 731
BSNT_03010___ 732 CCACGCCCGGCTGCTGGAAGGAAATCGATATGACATTGGCGATAAACTAG 781
..||||.|||..|||.|||||||..||.|.|||.||.||.|||||..|.|
RBAM_018310__ 732 TTACGCGCGGGAGCTTGAAGGAAGCCGGTTTGATATAGGAGATAAGTTCG 781
BSNT_03010___ 782 GCTGTTTTAAAGCGAGCACCGAAATC-GGCTTAATGCGTTCCGAAATGAG 830
||||||||||.||..||||.||.||| ||||| .||||....||||||||
RBAM_018310__ 782 GCTGTTTTAAGGCCGGCACGGAGATCGGGCTT-CTGCGGGAAGAAATGAG 830
BSNT_03010___ 831 ATCTCAGCTTTTGGCCTATTTAGAAGATGTGATCAAACGGGAAACGAAAG 880
|.|..|.|||||.||.|||||||||||.|||.|.|||.|.|||.|..|||
RBAM_018310__ 831 ACCGAAACTTTTAGCTTATTTAGAAGAGGTGTTAAAAAGAGAATCTGAAG 880
BSNT_03010___ 881 AAATGCTGCGGTAA 894
||||..||||.|||
RBAM_018310__ 881 AAATCGTGCGTTAA 894
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