Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04399 and RBAM_018260

See DNA alignment / Visit BSNT_04399 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:51
# Commandline: needle
#    -asequence pep-align/BSNT_04399___bioD.1.9828.seq
#    -bsequence pep-align/RBAM_018260___bioD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04399___bioD-RBAM_018260___bioD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04399___bioD-RBAM_018260___bioD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04399___bioD
# 2: RBAM_018260___bioD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 233
# Identity:     152/233 (65.2%)
# Similarity:   191/233 (82.0%)
# Gaps:           2/233 ( 0.9%)
# Score: 826.5
# 
#
#=======================================

BSNT_04399___      1 MRGFFVTGTDTEVGKTVISSGLAALLKEHNRDVGVYKPFLSGISRHHPDS     50
                     ||.||||||||.||||::|.||||..::...|:||:||||||:.|.||:|
RBAM_018260__      1 MRSFFVTGTDTGVGKTIVSCGLAAAFRQKQADIGVFKPFLSGVPRTHPES     50

BSNT_04399___     51 DTSLLKDMSQTSLSHEDITPFAFKAPLAPYVAGKLEGKTVTMEEVLSHWG    100
                     |||||||||||:||||:||||.:|.|||||.|..||||:|:|.:|::||.
RBAM_018260__     51 DTSLLKDMSQTALSHEEITPFEWKEPLAPYTAAMLEGKSVSMADVMAHWS    100

BSNT_04399___    101 RIREKHECFIVEGAGGISVPLGEDYLVSHVIKALQLPMIIVARPHLGTIN    150
                     :|:.:||||||||||||||||||:||||.:|||::||.:||.||.|||||
RBAM_018260__    101 KIKNRHECFIVEGAGGISVPLGENYLVSDLIKAMELPAVIVTRPDLGTIN    150

BSNT_04399___    151 HTFLTVKYAESMGLPIAGIIINGISDSPDEDEKTNPEMIERLCGVPILGV    200
                     ||:|||:||::||:.:.||||||:...|..||||||.|||.||.|||||:
RBAM_018260__    151 HTYLTVEYAKNMGIEVLGIIINGVRSRPGLDEKTNPSMIETLCKVPILGI    200

BSNT_04399___    201 TPKLANVTKETVLHMVKDHINLSLLMN--QMGV    231
                     ||||.:|:.|.:.||::.||::|..||  |||.
RBAM_018260__    201 TPKLDHVSSENIQHMIEKHIDVSSFMNLTQMGR    233


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