Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02946 and RBAM_018030
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence pep-align/BSNT_02946___yndH.1.9828.seq
# -bsequence pep-align/RBAM_018030___yndH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02946___yndH-RBAM_018030___yndH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02946___yndH-RBAM_018030___yndH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02946___yndH
# 2: RBAM_018030___yndH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 210
# Identity: 81/210 (38.6%)
# Similarity: 99/210 (47.1%)
# Gaps: 76/210 (36.2%)
# Score: 419.0
#
#
#=======================================
BSNT_02946___ 1 MSSIYEKSIINYHLLHPKLRKRYQLDGSQTFSGTGTMSEISGGSFLVRML 50
RBAM_018030__ 0 -------------------------------------------------- 0
BSNT_02946___ 51 LKLGVFFRCFFSERGKDIPFTIQNRTCLLKSQHTGIEWNRTFIFKGKKRF 100
..:..|:.:..|....|.|..||.|.||
RBAM_018030__ 1 ----------------------MKKRLLIINHCTRCCRNGTDFFKSKTRF 28
BSNT_02946___ 101 FDAIMIYDEKENRILDFFGKPHLLLSVLTFEASHDGSLTITSGKQWLLIC 150
|||:|.|||:||||||:||||.:|||.|..|||.||.|.||||:|||||.
RBAM_018030__ 29 FDAVMEYDERENRILDYFGKPRILLSELHLEASSDGGLVITSGRQWLLIG 78
BSNT_02946___ 151 GKRIPLPKWLTGTSVVCETFDEKKNCFTIEVHVQNTILGTLFFYKGTFQE 200
||:||||.||.|:|.|.|.:||:.|||:|:|||:|.||||||.|:|||:|
RBAM_018030__ 79 GKKIPLPAWLCGSSTVYEAYDEEMNCFSIKVHVKNRILGTLFSYRGTFRE 128
BSNT_02946___ 201 EERESCNEMA 210
.|.|:|
RBAM_018030__ 129 TEGETC---- 134
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