Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02096 and RBAM_018010

See DNA alignment / Visit BSNT_02096 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:48
# Commandline: needle
#    -asequence pep-align/BSNT_02096___exuT.1.9828.seq
#    -bsequence pep-align/RBAM_018010___exuT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02096___exuT-RBAM_018010___exuT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02096___exuT-RBAM_018010___exuT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02096___exuT
# 2: RBAM_018010___exuT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 423
# Identity:     353/423 (83.5%)
# Similarity:   386/423 (91.3%)
# Gaps:           2/423 ( 0.5%)
# Score: 1805.0
# 
#
#=======================================

BSNT_02096___      1 MFSKDKLPVILFLFLAGVINYLDRSALSIAAPFIQDDLTLSATQMGLIFS     50
                     |||||:.|:||.||.||||||||||||||||||||.||||||||||||||
RBAM_018010__      1 MFSKDRFPIILLLFSAGVINYLDRSALSIAAPFIQQDLTLSATQMGLIFS     50

BSNT_02096___     51 SFSIGYAIFNFLGGVASDRYGAKLTLFVAMVVWSLFSGAVALAFGFVSLL    100
                     |||:|||:||||||||||||||||||..||:|||||||||||||||||||
RBAM_018010__     51 SFSVGYAVFNFLGGVASDRYGAKLTLCTAMIVWSLFSGAVALAFGFVSLL    100

BSNT_02096___    101 IIRILFGMGEGPLSATINKMVNNWFPPTQRASVIGVTNSGTPLGGAISGP    150
                     |||:|||||||||||.|:|||||||||:|||:|||:||||||||||||||
RBAM_018010__    101 IIRVLFGMGEGPLSAAISKMVNNWFPPSQRATVIGLTNSGTPLGGAISGP    150

BSNT_02096___    151 IVGMIAVAFSWKVSFVLIMIIGLIWAVLWFKFVKEKPQETIKEAPAIKAE    200
                     |||||||||||||||||||||||:|.|:|||||||:|..| ::|||:|||
RBAM_018010__    151 IVGMIAVAFSWKVSFVLIMIIGLVWTVIWFKFVKERPAPT-EDAPAMKAE    199

BSNT_02096___    201 TSPGEK-IPLTFYLKQKTVLFTAFAFFAYNYILFFFLTWFPSYLVDERGL    249
                     ....|: ||:|||||||||||||||||||||||||||||||||||.||||
RBAM_018010__    200 IQSHEQHIPMTFYLKQKTVLFTAFAFFAYNYILFFFLTWFPSYLVKERGL    249

BSNT_02096___    250 SVESMSVITVIPWILGFIGLAAGGFVSDYVYKKTARKGVLFSRKVVLVTC    299
                     |||.|||:||||||||||||||||.:||||:||||.|||||||||:||||
RBAM_018010__    250 SVEFMSVVTVIPWILGFIGLAAGGMISDYVFKKTAGKGVLFSRKVILVTC    299

BSNT_02096___    300 LFSSAVLIGFAGLVATTAGAVTLVALSVFFLYLTGAIYWAVIQDVVDQNN    349
                     ||:||||||.||||.||..||.||||||||||:||:||||||.|||||.|
RBAM_018010__    300 LFASAVLIGLAGLVTTTVSAVILVALSVFFLYITGSIYWAVIHDVVDQRN    349

BSNT_02096___    350 VGSVGGFMHFLANTAGIIGPALTGFIVDQTGTFSGAFLLAGGLAVFASLA    399
                     ||||||||||||||||||||||||||.|::|:|||||||||||||.||.|
RBAM_018010__    350 VGSVGGFMHFLANTAGIIGPALTGFIADKSGSFSGAFLLAGGLAVLASAA    399

BSNT_02096___    400 VIRFVRPIIGKPAGTEAENPVSY    422
                     |||||||||.:.|..:.::.:.|
RBAM_018010__    400 VIRFVRPIIIQTASEDKKDTIPY    422


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