Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02096 and RBAM_018010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:48
# Commandline: needle
# -asequence dna-align/BSNT_02096___exuT.1.9828.seq
# -bsequence dna-align/RBAM_018010___exuT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02096___exuT-RBAM_018010___exuT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02096___exuT-RBAM_018010___exuT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02096___exuT
# 2: RBAM_018010___exuT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1288
# Identity: 958/1288 (74.4%)
# Similarity: 958/1288 (74.4%)
# Gaps: 38/1288 ( 3.0%)
# Score: 3498.5
#
#
#=======================================
BSNT_02096___ 1 ATGTTTTCAAAAGATAAGCTTCCC-GTTATCCTTTTTTTGTTCCTGGCAG 49
|||||.|||||.||| ||.||||| .||||.|||.||||.||....||.|
RBAM_018010__ 1 ATGTTCTCAAAGGAT-AGATTCCCTATTATTCTTCTTTTATTTTCAGCCG 49
BSNT_02096___ 50 GGGTGATTAATTACCTGGATCGCTCGGCGCTTTCCATTGCAGCTCCTTTT 99
||||||||||.||..|.||.|||||.|||||.||.||||||||.||.||.
RBAM_018010__ 50 GGGTGATTAACTATTTAGACCGCTCAGCGCTGTCTATTGCAGCGCCGTTC 99
BSNT_02096___ 100 ATTCAGGATGATCTCACATTGTCTGCCACGCAAATGGGCTTGATTTTCAG 149
||.|||.|.|||||||||||||||||.||.||||||||..||||||||||
RBAM_018010__ 100 ATACAGCAGGATCTCACATTGTCTGCAACCCAAATGGGGCTGATTTTCAG 149
BSNT_02096___ 150 CAGTTTTTCGATAGGTTATGCCATTTTTAACTTTCTTGGGGGCGTGGCAT 199
|||||||||..|.||.||.||..|.|||||||||||.||.||.||.||||
RBAM_018010__ 150 CAGTTTTTCTGTCGGATACGCTGTGTTTAACTTTCTCGGCGGTGTTGCAT 199
BSNT_02096___ 200 CCGACCGCTATGGGGCAAAGCTGACCTTATTTGTCGCGATGGTTGTTTGG 249
|.|||||.||.|||||.||..||||.||.|.|...||||||.|.||||||
RBAM_018010__ 200 CTGACCGGTACGGGGCTAAATTGACATTGTGTACGGCGATGATCGTTTGG 249
BSNT_02096___ 250 TCGCTGTTTAGCGGAGCAGTCGCCCTCGCTTTTGGCTTTGTCAGTCTGCT 299
||.||.||.||||||||.||.||.||.|||||.||.|||||.|||||..|
RBAM_018010__ 250 TCTCTTTTCAGCGGAGCGGTTGCGCTTGCTTTCGGATTTGTAAGTCTTTT 299
BSNT_02096___ 300 GATTATACGCATTCTCTTCGGAATGGGAGAAGGCCCGCTTTCGGCGACCA 349
||||||.||..||.|.|||||.|||||.||.||.|||||.|||||..|||
RBAM_018010__ 300 GATTATCCGTGTTTTATTCGGTATGGGGGAGGGGCCGCTGTCGGCTGCCA 349
BSNT_02096___ 350 TCAACAAGATGGTGAACAACTGGTTCCCGCCGACCCAGCGGGCGTCCGTT 399
|.|.|||.|||||.|||||.|||||.||.|||.|.|||||.||..|.||.
RBAM_018010__ 350 TAAGCAAAATGGTCAACAATTGGTTTCCTCCGTCTCAGCGCGCCACGGTC 399
BSNT_02096___ 400 ATCGGTGTAACCAACAGCGGCACGCCGCTCGGGGGAGCCATTTCCGGCCC 449
|||||..|.||.||||||||||||||||||||.||.||.|||||||||||
RBAM_018010__ 400 ATCGGCCTGACAAACAGCGGCACGCCGCTCGGCGGGGCGATTTCCGGCCC 449
BSNT_02096___ 450 GATAGTCGGCATGATCGCAGTGGCGTTCAGCTGGAAGGTATCCTTCGTTC 499
|||.|||||.|||||.||.||||||||||||||||||||.|||||.||.|
RBAM_018010__ 450 GATTGTCGGGATGATTGCTGTGGCGTTCAGCTGGAAGGTTTCCTTTGTCC 499
BSNT_02096___ 500 TCATTATGATTATTGGATTGATATGGGCAGTGCTCTGGTTCAAGTTTGTC 549
|.||.|||||.||.||.||..|.|||.|.||..|||||||.||.|||||.
RBAM_018010__ 500 TGATCATGATCATCGGTTTAGTCTGGACGGTCATCTGGTTTAAATTTGTA 549
BSNT_02096___ 550 AAAGAAAAGCCGCAAGAGACGATCAAGGAAGCACCGGCAATAAAAGCAG- 598
||||||..|||| |.|.|||...|.||.||.||||||||.|||||.|
RBAM_018010__ 550 AAAGAACGGCCG---GCGCCGACGGAAGACGCCCCGGCAATGAAAGCGGA 596
BSNT_02096___ 599 -----AAACGTCTCCCGGAG-AAAAAATTCCGCTCACCTTTTATCTGAAG 642
||.|| |..||| |..|.||.|||.|.|||||||||.||||.
RBAM_018010__ 597 GATTCAATCG----CATGAGCAGCATATCCCGATGACCTTTTATTTGAAA 642
BSNT_02096___ 643 CAAAAAACGGTCCTGTTCACGGCGTTCGCTTTTTTCGCTTACAACTACAT 692
|||||||||||.||.||||||||.||.||.||||||||.|||||.|||||
RBAM_018010__ 643 CAAAAAACGGTTCTCTTCACGGCTTTTGCCTTTTTCGCCTACAATTACAT 692
BSNT_02096___ 693 CCTCTTCTTCTTTTTGACATGGTTTCCGAGCTATCTTGTCGACGAACGGG 742
|.|.||.|||||.||.||||||||||||||||||||.||..|.|||||.|
RBAM_018010__ 693 CTTATTTTTCTTCTTAACATGGTTTCCGAGCTATCTGGTGAAAGAACGCG 742
BSNT_02096___ 743 GATTAAGTGTTGAATCGATGAGTGTCATCACGGTCATCCCGTGGATTTTA 792
|.|||||||||||||..|||||.||..|.||.||.||.||.||||||.|.
RBAM_018010__ 743 GTTTAAGTGTTGAATTTATGAGCGTGGTGACTGTTATTCCCTGGATTCTT 792
BSNT_02096___ 793 GGCTTTATCGGGCTGGCTGCGGGGGGATTTGTTTCTGACTATGTGTACAA 842
||.||||||||..||||.||.||.|||.|..|||||||.|||||.|.|||
RBAM_018010__ 793 GGATTTATCGGTTTGGCGGCAGGCGGAATGATTTCTGATTATGTATTCAA 842
BSNT_02096___ 843 AAAAACGGCTCGAAAAGGTGTGCTGTTCTCGCGCAAGGTTGTGCTTGTCA 892
||||||.||..|||||||.||..|||||||.||.||.||..|.|||||||
RBAM_018010__ 843 AAAAACCGCCGGAAAAGGGGTTTTGTTCTCACGGAAAGTCATTCTTGTCA 892
BSNT_02096___ 893 CATGTTTGTTTTCCTCAGCTGTCCTGATTGGTTTTGCCGGGCTTGTGGCA 942
|.|||.||||..|.||.|||||||||||.||.||.|||||.|||||..|.
RBAM_018010__ 893 CTTGTCTGTTCGCTTCCGCTGTCCTGATCGGATTGGCCGGACTTGTTACC 942
BSNT_02096___ 943 ACGACTGCGGGCGCTGTCACACTGGTCGCTTTGTCAGTATTTTTTCTATA 992
||.||.|...|.||.||.|..||.||.|||||.|||||.||.|||.||||
RBAM_018010__ 943 ACTACCGTAAGTGCCGTTATTCTCGTTGCTTTATCAGTCTTCTTTTTATA 992
BSNT_02096___ 993 TTTAACAGGTGCTATCTATTGGGCTGTCATTCAAGATGTGGTTGATCAAA 1042
|.||||.||..|||||||||||||.||.|||||.||||||||||||||||
RBAM_018010__ 993 TATAACGGGCTCTATCTATTGGGCGGTGATTCATGATGTGGTTGATCAAA 1042
BSNT_02096___ 1043 ACAATGTCGGTTCTGTTGGCGGCTTCATGCATTTCCTCGCCAACACGGCA 1092
..||||||||.||.||.||||||||.||||||||.||.||.||||||||.
RBAM_018010__ 1043 GGAATGTCGGATCAGTCGGCGGCTTTATGCATTTTCTTGCAAACACGGCC 1092
BSNT_02096___ 1093 GGAATTATCGGCCCGGCTTTAACCGGATTTATTGTTGACCAAACAGGCAC 1142
||.||||||||.||.|||||||||||.|||||.|..|||.|||..||..|
RBAM_018010__ 1093 GGTATTATCGGGCCTGCTTTAACCGGCTTTATCGCCGACAAAAGCGGATC 1142
BSNT_02096___ 1143 GTTTTCTGGAGCATTTTTGCTTGCCGGAGGGCTGGCTGTCTTCGCTTCAC 1192
.||.||.||.||.|||||||||||.||.||..|.||.||.||.||.||..
RBAM_018010__ 1143 ATTCTCCGGGGCGTTTTTGCTTGCAGGCGGATTAGCCGTTTTGGCCTCGG 1192
BSNT_02096___ 1193 TTGCTGTGATTCGTTTTGTCCGTCC---AATCATTGGCAAGCCAGCGGGA 1239
.|||.||.||.|||||.||.||.|| .|||||| |||.|| |..
RBAM_018010__ 1193 CTGCGGTAATCCGTTTCGTGCGCCCGATTATCATT--CAAACC----GCT 1236
BSNT_02096___ 1240 ACAGAAGCTGAGA--------ATCCTGTGTCTTATTAA 1269
.|.||||.|.|.| ||.| ||||||.|
RBAM_018010__ 1237 TCTGAAGATAAAAAAGACACGATAC-----CTTATTGA 1269
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