Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03293 and RBAM_017970
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:27
# Commandline: needle
# -asequence pep-align/BSNT_03293___kdgA.1.9828.seq
# -bsequence pep-align/RBAM_017970___kdgA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03293___kdgA-RBAM_017970___kdgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03293___kdgA-RBAM_017970___kdgA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03293___kdgA
# 2: RBAM_017970___kdgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 220
# Identity: 75/220 (34.1%)
# Similarity: 116/220 (52.7%)
# Gaps: 33/220 (15.0%)
# Score: 345.5
#
#
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BSNT_03293___ 1 -MESKVVENRLKEAKLIAVIRSKDTQEACQQIESLLDKGIRAVEVTYTTP 49
:....:..:|..|:::||||.:::|||.:..::.:..||.|:|:|||||
RBAM_017970__ 1 MLPKYAIYEKLLHAQVVAVIRGQNSQEALEVSKAAISGGISAIELTYTTP 50
BSNT_03293___ 50 GASDIIESFRNREDILIGAGTVITAQQAGEAAEAGAQFIVSPGFSADLAE 99
...|:.:..|: :|||:|||:|:..:.|..|..:||.||||..|..::|.
RBAM_017970__ 51 EVEDVFKELRH-QDILLGAGSVMDTETARHAILSGASFIVSSHFVKEIAS 99
BSNT_03293___ 100 HLSFVKTHYIPGVLTPSEIMEALTFGFTTLKLFPSGVFGIPFMKNLAGPF 149
..:.....|:||.::.|::..||..|...:||||:..|...|:|::.||.
RBAM_017970__ 100 LCNQYSVPYLPGCMSVSDMALALEAGCDVVKLFPANSFDPSFIKSVNGPL 149
BSNT_03293___ 150 PQVTFIPTGGIHPSEVPDWLRAGAGAVGVGSQLGSCSKEDLQAVFQV--- 196
|.|..:|||||..:.:.|||.|||.|||||| ||...:|.
RBAM_017970__ 150 PNVRIMPTGGISLNSMNDWLSAGAVAVGVGS--------DLTKAYQKGGY 191
BSNT_03293___ 196 -------------------- 196
RBAM_017970__ 192 EAAVSLSKEYVCRKNEYTGV 211
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