Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02996 and RBAM_017930

See DNA alignment / Visit BSNT_02996 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:51
# Commandline: needle
#    -asequence pep-align/BSNT_02996.1.9828.seq
#    -bsequence pep-align/RBAM_017930___ynfC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02996-RBAM_017930___ynfC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02996-RBAM_017930___ynfC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02996
# 2: RBAM_017930___ynfC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 117
# Identity:      86/117 (73.5%)
# Similarity:    98/117 (83.8%)
# Gaps:           0/117 ( 0.0%)
# Score: 440.0
# 
#
#=======================================

BSNT_02996         1 MKKVTILKASILFLAIASFHLLSIPHAFDIGHHYKAVADQQEMHEMKAGQ     50
                     |||:..|||||||||||||||||||||||..||:||||||||||||||||
RBAM_017930__      1 MKKILFLKASILFLAIASFHLLSIPHAFDTAHHFKAVADQQEMHEMKAGQ     50

BSNT_02996        51 NADDEKKSITGAFTLTALWAMAVLLLTAESKSTGYSRRRQRKKSFILAKF    100
                     ||||||||:||::.||||:|.:|.|:....:....||||||||||::|||
RBAM_017930__     51 NADDEKKSLTGSYILTALFAASVSLIVISDRRRPASRRRQRKKSFLIAKF    100

BSNT_02996       101 YQSSYFGKLHVQHHPIM    117
                     ||||||.:|||||...|
RBAM_017930__    101 YQSSYFDELHVQHRLSM    117


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