Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02994 and RBAM_017910

See DNA alignment / Visit BSNT_02994 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:51
# Commandline: needle
#    -asequence pep-align/BSNT_02994___parC.1.9828.seq
#    -bsequence pep-align/RBAM_017910___parC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02994___parC-RBAM_017910___parC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02994___parC-RBAM_017910___parC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02994___parC
# 2: RBAM_017910___parC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 807
# Identity:     711/807 (88.1%)
# Similarity:   766/807 (94.9%)
# Gaps:           1/807 ( 0.1%)
# Score: 3716.0
# 
#
#=======================================

BSNT_02994___      1 MSQPELFHDLPLEEVIGDRFGRYSKYIIQDRALPDARDGLKPVQRRILYA     50
                     |:||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017910__      1 MAQPELFHDLPLEEVIGDRFGRYSKYIIQDRALPDARDGLKPVQRRILYA     50

BSNT_02994___     51 MHTDGNTFDKNFRKAAKTVGNVIGNYHPHGDSSVYEAMVRMSQDWKVRNV    100
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017910__     51 MHADGNTFDKNFRKAAKTVGNVIGNYHPHGDSSVYEAMVRMSQDWKVRNV    100

BSNT_02994___    101 LIEMHGNNGSIDGDPPAAMRYTEARLSPIASELLRDIDKNTVEFVPNFDD    150
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
RBAM_017910__    101 LIEMHGNNGSIDGDPPAAMRYTEARLSSIASELLRDIDKNTVEFVPNFDD    150

BSNT_02994___    151 TSKEPVVLPAMFPNLLVNGSTGISAGYATDIPPHHLGEVIDAVIKRIQMP    200
                     |||||||||||||||||||||||||||||||||||||||||||||||:.|
RBAM_017910__    151 TSKEPVVLPAMFPNLLVNGSTGISAGYATDIPPHHLGEVIDAVIKRIESP    200

BSNT_02994___    201 SCSVDELMEVIKGPDFPTGGIIQGVDGIRKAYETGKGKIIIRGKAEIETI    250
                     .|:||:||:|||||||||||||||||||||||||||||||||||||:|::
RBAM_017910__    201 DCTVDDLMQVIKGPDFPTGGIIQGVDGIRKAYETGKGKIIIRGKAEVESV    250

BSNT_02994___    251 RGGREQIVITEIPFEVNKANLVKKMDEFRIDKKVEGISEVRDETDRTGLR    300
                     |||||||||||||||||||||||||||:||||||||||||||||||||||
RBAM_017910__    251 RGGREQIVITEIPFEVNKANLVKKMDEYRIDKKVEGISEVRDETDRTGLR    300

BSNT_02994___    301 VVIELKKEADAKGILNFLYKNTDLQITYNFNMVAIHNRRPMLMSLPSILD    350
                     ||:||||||||||||||||||||||.|||||||||||||||||||.:|||
RBAM_017910__    301 VVVELKKEADAKGILNFLYKNTDLQTTYNFNMVAIHNRRPMLMSLTAILD    350

BSNT_02994___    351 AYIGHQKEVVTNRSVYELQKAKDRHHIVEGLMKALSILDEVIATIRSSSD    400
                     |||.|||||||||||:||||||:|||||||||||||:||||||.||:|||
RBAM_017910__    351 AYISHQKEVVTNRSVFELQKAKERHHIVEGLMKALSVLDEVIAVIRASSD    400

BSNT_02994___    401 KRDAKNNLIAKYEFTEPQAEAIVSLQLYRLTNTDITALKEEAEELGKKIE    450
                     |:|||.|:::|:.||||||||||||||||||||||||||||||||.|||:
RBAM_017910__    401 KKDAKQNVMSKFTFTEPQAEAIVSLQLYRLTNTDITALKEEAEELSKKIQ    450

BSNT_02994___    451 ELESILSNDKKLLKVITNSLKALKKKYADTRRSVIEEKIEEIKINLEVMV    500
                     |||:|||:|||||||||:|||.|||.|||:||||||||||||||||||||
RBAM_017910__    451 ELEAILSHDKKLLKVITSSLKKLKKTYADSRRSVIEEKIEEIKINLEVMV    500

BSNT_02994___    501 ASEDVYVTVTKDGYLKRTSQRSFAASNGQDFGMKDTDRMLHQFEMNTTDV    550
                     ||||||||||||||:|||||||||||||||||||||||::||||||||||
RBAM_017910__    501 ASEDVYVTVTKDGYVKRTSQRSFAASNGQDFGMKDTDRLIHQFEMNTTDV    550

BSNT_02994___    551 LLLFTNKGSYIYCPVHQLPDIRWKDMGQHFSNLITIDRDETIVKAIPIKE    600
                     ||||||||||:||||||||||||||||||.:|:||||||||||||||:||
RBAM_017910__    551 LLLFTNKGSYVYCPVHQLPDIRWKDMGQHVTNIITIDRDETIVKAIPVKE    600

BSNT_02994___    601 FDPSAYLLFFTKNGMVKKTELTHYKAQRYSKALVALNLKGEDELIDVHVT    650
                     ||||:||||.|||||||:||:|||||||||||||||||||:|||||||||
RBAM_017910__    601 FDPSSYLLFMTKNGMVKRTEMTHYKAQRYSKALVALNLKGDDELIDVHVT    650

BSNT_02994___    651 NGESQIFMATHLGYGLWFGEDEVNVVGARAAGVKGINLKEDDFVVSGEIL    700
                     :|.||:|:||.||||||||||||||||||||||||||:|:.|.||||:||
RBAM_017910__    651 DGGSQLFIATRLGYGLWFGEDEVNVVGARAAGVKGINVKDGDTVVSGQIL    700

BSNT_02994___    701 QQSDSIVLFTQRGAVKRMSLSEFEKTSRAKRGVVMLRELKKNPHRVVALF    750
                     .::||:||.|||||:|||:||||||||||||||:|||||||||||.|.:|
RBAM_017910__    701 HETDSLVLVTQRGAIKRMNLSEFEKTSRAKRGVIMLRELKKNPHRAVGVF    750

BSNT_02994___    751 ACGLEQRLMAETEKGDRKELQAKELRTNDRYSNGSFFFDEEESGKVTAVW    800
                     ||.|...:.||||||:|.|:..|.||.||||||||||.||:|:|.||.||
RBAM_017910__    751 ACALADMIAAETEKGERIEIAVKSLRANDRYSNGSFFTDEDETGPVTDVW    800

BSNT_02994___    801 RLHTEQ-    806
                     |:.... 
RBAM_017910__    801 RIPASDV    807


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02994 and RBAM_017910

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
