Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02991 and RBAM_017890

See DNA alignment / Visit BSNT_02991 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:50
# Commandline: needle
#    -asequence pep-align/BSNT_02991___yneT.1.9828.seq
#    -bsequence pep-align/RBAM_017890___yneT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02991___yneT-RBAM_017890___yneT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02991___yneT-RBAM_017890___yneT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02991___yneT
# 2: RBAM_017890___yneT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 135
# Identity:     116/135 (85.9%)
# Similarity:   128/135 (94.8%)
# Gaps:           0/135 ( 0.0%)
# Score: 605.0
# 
#
#=======================================

BSNT_02991___      1 MQNPSKAEIKEILQRSKRIAVVGLSDRPDRTSHMVSKAMQDAGYEIIPVN     50
                     ||||||:||||||.||||||||||||||||||:||||||||.||||||||
RBAM_017890__      1 MQNPSKSEIKEILDRSKRIAVVGLSDRPDRTSYMVSKAMQDEGYEIIPVN     50

BSNT_02991___     51 PTIDEALGIKAVSSLKEIDGPIDIVNVFRRSEQLPGVAEEFLETDAPVFW    100
                     ||||||||:|||:|||:::|||||||||||||||||||||||:|||||||
RBAM_017890__     51 PTIDEALGVKAVASLKDVEGPIDIVNVFRRSEQLPGVAEEFLQTDAPVFW    100

BSNT_02991___    101 AQQGLVNEEAYQMLKEKGRTVIMDLCIKVAHAVTK    135
                     |||||.|||||:|:.:||||.:||||||||.||.|
RBAM_017890__    101 AQQGLANEEAYRMITDKGRTAVMDLCIKVARAVIK    135


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.