Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02991 and RBAM_017890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:51
# Commandline: needle
# -asequence dna-align/BSNT_02991___yneT.1.9828.seq
# -bsequence dna-align/RBAM_017890___yneT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02991___yneT-RBAM_017890___yneT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02991___yneT-RBAM_017890___yneT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02991___yneT
# 2: RBAM_017890___yneT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 408
# Identity: 311/408 (76.2%)
# Similarity: 311/408 (76.2%)
# Gaps: 0/408 ( 0.0%)
# Score: 1167.0
#
#
#=======================================
BSNT_02991___ 1 ATGCAAAATCCTTCTAAAGCGGAAATTAAAGAGATTCTTCAAAGAAGCAA 50
||||||||||||||.|||.|.||.||||||||.|||||..|..|.|||||
RBAM_017890__ 1 ATGCAAAATCCTTCAAAATCAGAGATTAAAGAAATTCTGGATCGGAGCAA 50
BSNT_02991___ 51 ACGTATAGCGGTAGTAGGGCTTTCAGACCGTCCGGATAGAACGTCACATA 100
|||.||.||.||.||.|||||.|||||||||||.||..|.||.||..|.|
RBAM_017890__ 51 ACGGATCGCAGTCGTCGGGCTGTCAGACCGTCCCGACCGGACTTCTTACA 100
BSNT_02991___ 101 TGGTTTCAAAAGCAATGCAGGACGCGGGTTATGAAATTATCCCTGTGAAC 150
|||||||.|||||.||||||||.|..||.|||||||||||.||.||.||.
RBAM_017890__ 101 TGGTTTCCAAAGCGATGCAGGATGAAGGGTATGAAATTATTCCCGTCAAT 150
BSNT_02991___ 151 CCTACAATTGATGAGGCGCTAGGTATCAAAGCCGTTTCATCTTTAAAAGA 200
||.||.||||||||||||||.||..|.||||||||..|.||.||||||||
RBAM_017890__ 151 CCAACGATTGATGAGGCGCTTGGCGTTAAAGCCGTCGCTTCATTAAAAGA 200
BSNT_02991___ 201 GATAGACGGTCCGATTGACATCGTAAATGTATTCCGGCGATCAGAACAGC 250
..|.||.||.||||||||.|||||.|||||.|||.|.||.||.||.||||
RBAM_017890__ 201 CGTGGAGGGACCGATTGATATCGTGAATGTGTTCAGACGCTCTGAGCAGC 250
BSNT_02991___ 251 TTCCTGGAGTGGCGGAAGAGTTTTTAGAGACAGATGCGCCAGTATTTTGG 300
||||.||.||.||.|||||.||||||.||||.||.||.||.||.||||||
RBAM_017890__ 251 TTCCCGGCGTCGCTGAAGAATTTTTACAGACGGACGCTCCCGTTTTTTGG 300
BSNT_02991___ 301 GCACAGCAAGGGCTAGTTAATGAGGAAGCATACCAGATGCTAAAAGAAAA 350
||.|||||.||.||.|..|||||.|||||.||.|..|||.|.|.|||.||
RBAM_017890__ 301 GCGCAGCAGGGCCTTGCAAATGAAGAAGCGTATCGCATGATTACAGACAA 350
BSNT_02991___ 351 AGGCAGAACGGTTATCATGGATCTGTGCATAAAAGTGGCACACGCTGTAA 400
|||..|.||||.|.|.||||||.|.||.||||||||.||.|.||||||.|
RBAM_017890__ 351 AGGACGGACGGCTGTTATGGATTTATGTATAAAAGTCGCCCGCGCTGTTA 400
BSNT_02991___ 401 CAAAATAG 408
.|||||||
RBAM_017890__ 401 TAAAATAG 408
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