Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02988 and RBAM_017870

See DNA alignment / Visit BSNT_02988 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:50
# Commandline: needle
#    -asequence pep-align/BSNT_02988___yneR.1.9828.seq
#    -bsequence pep-align/RBAM_017870___yneR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02988___yneR-RBAM_017870___yneR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02988___yneR-RBAM_017870___yneR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02988___yneR
# 2: RBAM_017870___yneR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 95
# Identity:      69/95 (72.6%)
# Similarity:    80/95 (84.2%)
# Gaps:           0/95 ( 0.0%)
# Score: 392.0
# 
#
#=======================================

BSNT_02988___      1 MNMTINEDALNWYKEELDLESGDQVRFFVRYGGCSNVQKGFSLGVAKDAP     50
                     |||.:.:.||:|||||||||:||.||||||||||||||||||||:.||.|
RBAM_017870__      1 MNMKVTKGALDWYKEELDLETGDHVRFFVRYGGCSNVQKGFSLGILKDRP     50

BSNT_02988___     51 QEAGVTAEADGITFFIEESDLWYFDNHDLLVSYSEDADEPVFEYQ     95
                     ...|.:.|.:|||||||||||||||||||.|:||:.|:||||:|.
RBAM_017870__     51 MNIGTSTEVEGITFFIEESDLWYFDNHDLSVTYSDQAEEPVFDYV     95


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