Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02982 and RBAM_017840

See DNA alignment / Visit BSNT_02982 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:50
# Commandline: needle
#    -asequence pep-align/BSNT_02982___tlp.1.9828.seq
#    -bsequence pep-align/RBAM_017840___tlp.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02982___tlp-RBAM_017840___tlp.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02982___tlp-RBAM_017840___tlp.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02982___tlp
# 2: RBAM_017840___tlp
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 83
# Identity:      66/83 (79.5%)
# Similarity:    76/83 (91.6%)
# Gaps:           3/83 ( 3.6%)
# Score: 335.0
# 
#
#=======================================

BSNT_02982___      1 MTKNQNQYQQPNPDDRSDNVEKLQDMVQNTIENIEEAEASMEFASGEDKQ     50
                     ||   |.||:|||||||||||||||||||||||||||:.|||||:.|:||
RBAM_017840__      1 MT---NNYQKPNPDDRSDNVEKLQDMVQNTIENIEEAKESMEFATDEEKQ     47

BSNT_02982___     51 RIKEKNARREQSIEAFRNEIQDESAARQNGYRS     83
                     ||:||||||.:|||:||:|||||||||:|||:|
RBAM_017840__     48 RIQEKNARRNESIESFRSEIQDESAARENGYQS     80


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.