Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02982 and RBAM_017840

See Amino acid alignment / Visit BSNT_02982 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:50
# Commandline: needle
#    -asequence dna-align/BSNT_02982___tlp.1.9828.seq
#    -bsequence dna-align/RBAM_017840___tlp.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02982___tlp-RBAM_017840___tlp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02982___tlp-RBAM_017840___tlp.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02982___tlp
# 2: RBAM_017840___tlp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 253
# Identity:     192/253 (75.9%)
# Similarity:   192/253 (75.9%)
# Gaps:          11/253 ( 4.3%)
# Score: 735.5
# 
#
#=======================================

BSNT_02982___      1 ATGACAAAGAACCAAAATCAA-TATCAGCAGCCTAATCCTGATGATCGTT     49
                     ||||||||          ||| |||||..|.||.|||||.|||||.||||
RBAM_017840__      1 ATGACAAA----------CAATTATCAAAAACCGAATCCGGATGACCGTT     40

BSNT_02982___     50 CTGACAATGTGGAAAAATTGCAGGATATGGTTCAAAATACAATTGAAAAT     99
                     |.||.||.||.|||||..|||||||||||||.||.|||||||||||||||
RBAM_017840__     41 CCGATAACGTTGAAAAGCTGCAGGATATGGTGCAGAATACAATTGAAAAT     90

BSNT_02982___    100 ATAGAAGAAGCAGAAGCATCAATGGAGTTTGCTTCAGGAGAAGATAAACA    149
                     |||||||||||..|||.|||||||||.|||||..|||..||.||.|||||
RBAM_017840__     91 ATAGAAGAAGCCAAAGAATCAATGGAATTTGCGACAGATGAGGAAAAACA    140

BSNT_02982___    150 GCGTATCAAAGAAAAAAATGCAAGGCGCGAACAGAGCATTGAAGCGTTTC    199
                     |||.||..||||.||.|||||.||.|||.|..|.|||||||||.||||.|
RBAM_017840__    141 GCGCATTCAAGAGAAGAATGCCAGACGCAATGAAAGCATTGAATCGTTCC    190

BSNT_02982___    200 GTAATGAAATACAGGACGAATCTGCAGCGAGACAAAACGGATACCGTTCT    249
                     |.|.||||||.|||||.|||||.||.||.|||.|||||||.||.|..||.
RBAM_017840__    191 GCAGTGAAATCCAGGATGAATCGGCTGCAAGAGAAAACGGCTATCAATCA    240

BSNT_02982___    250 TAA    252
                     |||
RBAM_017840__    241 TAA    243


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