Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02980 and RBAM_017820

See DNA alignment / Visit BSNT_02980 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:50
# Commandline: needle
#    -asequence pep-align/BSNT_02980.1.9828.seq
#    -bsequence pep-align/RBAM_017820.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02980-RBAM_017820.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02980-RBAM_017820.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02980
# 2: RBAM_017820
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 63
# Identity:      39/63 (61.9%)
# Similarity:    41/63 (65.1%)
# Gaps:          22/63 (34.9%)
# Score: 201.0
# 
#
#=======================================

BSNT_02980         1 MLRYAYKFSELEKIKEYAEVRSVKKMRKRSFHELVMENKKELMTNTEYLN     50
                                           :||||||||||||||||:||||||||||
RBAM_017820        1 ----------------------MKKMRKRSFHELVMENKRELMTNTEYLN     28

BSNT_02980        51 QLEEKLEQRFKQK     63
                     |||||||||||||
RBAM_017820       29 QLEEKLEQRFKQK     41


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