Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02980 and RBAM_017820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:50
# Commandline: needle
# -asequence dna-align/BSNT_02980.1.9828.seq
# -bsequence dna-align/RBAM_017820.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02980-RBAM_017820.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02980-RBAM_017820.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02980
# 2: RBAM_017820
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity: 105/192 (54.7%)
# Similarity: 105/192 (54.7%)
# Gaps: 66/192 (34.4%)
# Score: 441.0
#
#
#=======================================
BSNT_02980 1 ATGCTCAGATATGCTTACAAGTTTTCAGAATTGGAAAAAATAAAAGAATA 50
RBAM_017820 0 -------------------------------------------------- 0
BSNT_02980 51 TGCGGAGGTGAGAAGCGTGAAGAAGATGAGAAAACGTTCTTTTCATGAGC 100
.||||.||.|||.|||||||||||||||||||..
RBAM_017820 1 ----------------TTGAAAAAAATGCGAAAACGTTCTTTTCATGAAT 34
BSNT_02980 101 TCGTCATGGAAAACAAAAAAGAGCTGATGACCAATACAGAGTATTTAAAT 150
|.||.||||||||.|||...|||||||||||||||||.||.|||||.|||
RBAM_017820 35 TGGTTATGGAAAATAAACGTGAGCTGATGACCAATACGGAATATTTGAAT 84
BSNT_02980 151 CAGCTTGAGGAAAAGCTTGAACAGCGATTTAAGCAAAAATAA 192
||||||||.||||||||.||.|||||.||.||.|||||||||
RBAM_017820 85 CAGCTTGAAGAAAAGCTGGAGCAGCGGTTCAAACAAAAATAA 126
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