Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02979 and RBAM_017810

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:50
# Commandline: needle
#    -asequence pep-align/BSNT_02979___yneN.1.9828.seq
#    -bsequence pep-align/RBAM_017810___yneN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02979___yneN-RBAM_017810___yneN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02979___yneN-RBAM_017810___yneN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02979___yneN
# 2: RBAM_017810___yneN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 170
# Identity:     116/170 (68.2%)
# Similarity:   135/170 (79.4%)
# Gaps:           1/170 ( 0.6%)
# Score: 611.0
# 
#
#=======================================

BSNT_02979___      1 MLKKWLAGILLIMLAGYTGWNLYQTYSKKEVGIQEGKQAPDFSLKTLSGE     50
                     ||.|||.|:|||.|..|.|||:|......:.|.:||.:||||:|.||||:
RBAM_017810__      1 MLAKWLGGMLLIGLLVYAGWNIYSVQKSPKEGTEEGMKAPDFTLDTLSGK     50

BSNT_02979___     51 KSSLQDAKGKKVLLNFWATWCKPCRQEMPAMEKLQKEYADKLAVVAVNFT    100
                     ..||.|.||||||||||||||||||.|||.|::|||||.| :||.|||||
RBAM_017810__     51 SISLSDYKGKKVLLNFWATWCKPCRMEMPDMQELQKEYPD-IAVAAVNFT     99

BSNT_02979___    101 SAEKSEKQVRAFADTYDLTFPILIDKKGINADYNVMSYPTTYILDEKGVI    150
                     |:||:.:.|::|||.|.|||||||||.|||.|:||:||||||||||||.|
RBAM_017810__    100 SSEKNIQAVKSFADHYQLTFPILIDKSGINGDFNVLSYPTTYILDEKGTI    149

BSNT_02979___    151 QDIHVGTMTKKEMEQKLDLD    170
                     |.|.|||||||||::||||.
RBAM_017810__    150 QHIRVGTMTKKEMKEKLDLK    169


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