Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02978 and RBAM_017800

See DNA alignment / Visit BSNT_02978 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:49
# Commandline: needle
#    -asequence pep-align/BSNT_02978___citB.1.9828.seq
#    -bsequence pep-align/RBAM_017800___citB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02978___citB-RBAM_017800___citB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02978___citB-RBAM_017800___citB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02978___citB
# 2: RBAM_017800___citB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 909
# Identity:     851/909 (93.6%)
# Similarity:   884/909 (97.2%)
# Gaps:           1/909 ( 0.1%)
# Score: 4448.0
# 
#
#=======================================

BSNT_02978___      1 MANEQKTAAKDVFQARKTFTTNGKTYHYYSLKALEDSGIGKVSKLPYSIK     50
                     |.|:||.|.:|||||||||::|||||:|||||||||:|:|.|||||||||
RBAM_017800__      1 MTNQQKVATQDVFQARKTFSSNGKTYNYYSLKALEDAGVGNVSKLPYSIK     50

BSNT_02978___     51 VLLESVLRQVDGFVIKKEHVENLAKWGTAELKDIDVPFKPSRVILQDFTG    100
                     ||||||||||||.||.||||||||:|||||||||||||||||||||||||
RBAM_017800__     51 VLLESVLRQVDGRVITKEHVENLARWGTAELKDIDVPFKPSRVILQDFTG    100

BSNT_02978___    101 VPAVVDLASLRKAMAAVGGDPDKINPEIPVDLVIDHSVQVDKAGTEDALA    150
                     |||||||||||||||:||||||||||||||||||||||||||||||||||
RBAM_017800__    101 VPAVVDLASLRKAMASVGGDPDKINPEIPVDLVIDHSVQVDKAGTEDALA    150

BSNT_02978___    151 VNMDLEFERNAERYKFLSWAKKAFNNYQAVPPATGIVHQVNLEFLASVVH    200
                     :|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017800__    151 INMDLEFERNAERYKFLSWAKKAFNNYQAVPPATGIVHQVNLEFLASVVH    200

BSNT_02978___    201 AIEEDGELVTYPDTLVGTDSHTTMINGIGVLGWGVGGIEAEAGMLGQPSY    250
                     ..||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017800__    201 TKEEDGELVTYPDTLVGTDSHTTMINGIGVLGWGVGGIEAEAGMLGQPSY    250

BSNT_02978___    251 FPVPEVIGAKLVGKLPNGTTATDLALKVTQVLREKGVVGKFVEFFGPGIA    300
                     ||||||||||||||||||||||||||||||||||||||.|||||||||:|
RBAM_017800__    251 FPVPEVIGAKLVGKLPNGTTATDLALKVTQVLREKGVVNKFVEFFGPGVA    300

BSNT_02978___    301 ELPLADRATIANMAPEYGATCGFFPVDEEALNYLRLTGRDPEHIDVVEAY    350
                     |||||||||||||||||||||||||||||||:|||||||:.|.||:||||
RBAM_017800__    301 ELPLADRATIANMAPEYGATCGFFPVDEEALSYLRLTGREEEQIDIVEAY    350

BSNT_02978___    351 CRSNGLFYTPDAEDPQFTDVVEIDLSQIEANLSGPKRPQDLIPLSAMQET    400
                     ||:||||||||||:|.||||||||||:||||||||||||||||||.||||
RBAM_017800__    351 CRNNGLFYTPDAEEPIFTDVVEIDLSKIEANLSGPKRPQDLIPLSVMQET    400

BSNT_02978___    401 FKKQLVSPAGNQGFGLNAEEENKEIKFKLLNGEETVMKTGAIAIAAITSC    450
                     |||.|||||||||||.:|.||||||.|||.:||:.|||||||||||||||
RBAM_017800__    401 FKKHLVSPAGNQGFGADAAEENKEISFKLNSGEDAVMKTGAIAIAAITSC    450

BSNT_02978___    451 TNTSNPYVLIGAGLVAKKAVELGLKVPNYVKTSLAPGSKVVTGYLVNSGL    500
                     ||||||:|||||||||||||||||||||||||||||||||||||||||||
RBAM_017800__    451 TNTSNPFVLIGAGLVAKKAVELGLKVPNYVKTSLAPGSKVVTGYLVNSGL    500

BSNT_02978___    501 LPYMKELGFNLVGYGCTTCIGNSGPLSPEIEEAVAKNDLLITSVLSGNRN    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017800__    501 LPYMKELGFNLVGYGCTTCIGNSGPLSPEIEEAVAKNDLLITSVLSGNRN    550

BSNT_02978___    551 FEGRIHPLVKGNYLASPPLVVAYALAGTVNINLKTDPIGVGKDGQNVYFN    600
                     |||||||||||||||||||||||||||||||||||||||||.|||||||:
RBAM_017800__    551 FEGRIHPLVKGNYLASPPLVVAYALAGTVNINLKTDPIGVGNDGQNVYFD    600

BSNT_02978___    601 DIWPSMDEINALVKQTVTPELFRKEYETVFDDNKRWNEIETTDEALYKWD    650
                     ||||||||||:||||||||||||||||||||||:||||||||||||||||
RBAM_017800__    601 DIWPSMDEINSLVKQTVTPELFRKEYETVFDDNQRWNEIETTDEALYKWD    650

BSNT_02978___    651 SESTYIQNPPFFEEMSVEPGKVEPLKGLRVVGKFGDSVTTDHISPAGAIG    700
                     .:|||||||||||||||||||||||:||||||||||||||||||||||||
RBAM_017800__    651 QDSTYIQNPPFFEEMSVEPGKVEPLRGLRVVGKFGDSVTTDHISPAGAIG    700

BSNT_02978___    701 KDTPAGKYLQEKGVSPRDFNSYGSRRGNHEVMMRGTFANIRIKNQIAPGT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017800__    701 KDTPAGKYLQEKGVSPRDFNSYGSRRGNHEVMMRGTFANIRIKNQIAPGT    750

BSNT_02978___    751 EGGFTTYWPTGEVTSIYDACMKYKEDKTGLVVLAGKDYGMGSSRDWAAKG    800
                     |||:||:||||||||||||||:||||||||||||||||||||||||||||
RBAM_017800__    751 EGGYTTHWPTGEVTSIYDACMRYKEDKTGLVVLAGKDYGMGSSRDWAAKG    800

BSNT_02978___    801 TNLLGIRTVIAESFERIHRSNLVFMGVLPLQFKQGENADTLGLTGKEVIE    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017800__    801 TNLLGIRTVIAESFERIHRSNLVFMGVLPLQFKQGENADTLGLTGKEVIE    850

BSNT_02978___    851 VDVDETVRPRDLVTVRAINEDGNVTTFEAVVRFDSEVEIDYYRHGGILQM    900
                     |||||:||||||:|||||:|||.|.|||.|||||||||||||||||||||
RBAM_017800__    851 VDVDESVRPRDLLTVRAISEDGTVKTFEVVVRFDSEVEIDYYRHGGILQM    900

BSNT_02978___    901 VLREKMKQS    909
                     |||:|||| 
RBAM_017800__    901 VLRDKMKQ-    908


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