Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02978 and RBAM_017800
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Amino acid alignment /
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:50
# Commandline: needle
# -asequence dna-align/BSNT_02978___citB.1.9828.seq
# -bsequence dna-align/RBAM_017800___citB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02978___citB-RBAM_017800___citB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02978___citB-RBAM_017800___citB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02978___citB
# 2: RBAM_017800___citB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2742
# Identity: 2256/2742 (82.3%)
# Similarity: 2256/2742 (82.3%)
# Gaps: 27/2742 ( 1.0%)
# Score: 9307.5
#
#
#=======================================
BSNT_02978___ 1 ATGGCAAACGAGCAAAAAACTGCAGCAAAAGACGTTTTCCAAGCGAGAAA 50
|||.||||..||||||||...|||.||.||||||||||||||||.|||||
RBAM_017800__ 1 ATGACAAATCAGCAAAAAGTCGCAACACAAGACGTTTTCCAAGCAAGAAA 50
BSNT_02978___ 51 AACGTTTACTACAAATGGGAAAACATATCATTACTACTCTTTAAAAGCGT 100
|||.|||.||.||||||||||||||||..|.|||||.||.||||||||.|
RBAM_017800__ 51 AACATTTTCTTCAAATGGGAAAACATACAACTACTATTCATTAAAAGCAT 100
BSNT_02978___ 101 TAGAAGATTCAGGTATAGGAAAGGTTTCGAAGCTTCCTTATTCCATCAAA 150
|.|||||..||||..|.||.||.|||||.||.|||||||||||.||.||.
RBAM_017800__ 101 TGGAAGACGCAGGGGTCGGCAATGTTTCAAAACTTCCTTATTCTATTAAG 150
BSNT_02978___ 151 GTTCTTTTAGAATCAGTATTGCGTCAAGTTGACGGCTTCGTTATCAAAAA 200
||||||||.|||||.||.||||||||.||.|||||...|||.||.|.|||
RBAM_017800__ 151 GTTCTTTTGGAATCCGTTTTGCGTCAGGTAGACGGACGCGTCATTACAAA 200
BSNT_02978___ 201 AGAACACGTGGAAAATTTGGCAAAATGGGGAACTGCCGAATTAAAGGATA 250
||||||.||.||||||||.||||.||||||.|||||.||||||||.||||
RBAM_017800__ 201 AGAACATGTTGAAAATTTAGCAAGATGGGGTACTGCTGAATTAAAAGATA 250
BSNT_02978___ 251 TCGACGTTCCGTTCAAACCGTCTCGAGTTATTTTACAAGACTTCACAGGG 300
||||.||.|||||.||||||||.||.||||||.||||.|||||.||.||.
RBAM_017800__ 251 TCGATGTGCCGTTTAAACCGTCACGGGTTATTCTACAGGACTTTACCGGC 300
BSNT_02978___ 301 GTTCCGGCAGTAGTAGATCTGGCTTCACTGCGTAAAGCAATGGCAGCTGT 350
||||||||.|||||.||.|||||.||..|..|.|||||.|||||..||||
RBAM_017800__ 301 GTTCCGGCCGTAGTTGACCTGGCATCTTTAAGAAAAGCCATGGCTTCTGT 350
BSNT_02978___ 351 CGGCGGAGATCCTGATAAAATCAACCCTGAAATTCCTGTTGATCTCGTTA 400
|||||||||.||||||||||||||.|||||||||||.|||||.||.||.|
RBAM_017800__ 351 CGGCGGAGACCCTGATAAAATCAATCCTGAAATTCCGGTTGACCTGGTCA 400
BSNT_02978___ 401 TCGACCACTCTGTACAGGTAGATAAAGCGGGTACAGAAGATGCATTAGCA 450
|.|||||.||.|||||.||.||.|||||.|||||.|||||.||.|||||.
RBAM_017800__ 401 TTGACCATTCCGTACAAGTCGACAAAGCCGGTACGGAAGACGCGTTAGCC 450
BSNT_02978___ 451 GTAAATATGGACTTGGAATTCGAAAGAAATGCAGAGCGCTACAAATTTTT 500
.|.|||||||||||.||||||||||||||||||||.||.||.||||||||
RBAM_017800__ 451 ATTAATATGGACTTAGAATTCGAAAGAAATGCAGAACGTTATAAATTTTT 500
BSNT_02978___ 501 AAGCTGGGCAAAGAAAGCGTTTAATAATTATCAGGCAGTGCCGCCTGCAA 550
||||||||||||||||||||||||.|||||||||||.||.||||||||||
RBAM_017800__ 501 AAGCTGGGCAAAGAAAGCGTTTAACAATTATCAGGCCGTTCCGCCTGCAA 550
BSNT_02978___ 551 CAGGTATTGTGCACCAGGTCAACCTTGAGTTCTTGGCAAGTGTTGTCCAT 600
|||||||.||.||||||||.|||||||||||.|||||||||||.||.|||
RBAM_017800__ 551 CAGGTATCGTTCACCAGGTAAACCTTGAGTTTTTGGCAAGTGTCGTTCAT 600
BSNT_02978___ 601 GCCATTGAAGAAGACGGCGAGCTTGTAACGTATCCTGATACGCTTGTCGG 650
.|.|..||.||||||||.||.|||||.||.|||||||||||..|.||.||
RBAM_017800__ 601 ACGAAAGAGGAAGACGGAGAACTTGTGACATATCCTGATACATTGGTGGG 650
BSNT_02978___ 651 AACAGACTCACACACAACAATGATTAACGGTATCGGTGTTCTCGGCTGGG 700
||||||.||.||.|||||||||||||||||.|||||.||.||||||||||
RBAM_017800__ 651 AACAGATTCCCATACAACAATGATTAACGGAATCGGCGTCCTCGGCTGGG 700
BSNT_02978___ 701 GTGTCGGTGGAATTGAAGCTGAAGCGGGAATGCTTGGACAGCCTTCTTAC 750
|||||||.||.|||||.||.||||||||||||||.||.||||||||.||.
RBAM_017800__ 701 GTGTCGGCGGTATTGAGGCGGAAGCGGGAATGCTCGGCCAGCCTTCATAT 750
BSNT_02978___ 751 TTCCCAGTTCCAGAGGTAATCGGCGCGAAACTTGTCGGCAAGCTTCCAAA 800
|||||.|||||.|||||.||||||||||||||||||||.||..|.||.||
RBAM_017800__ 751 TTCCCTGTTCCTGAGGTCATCGGCGCGAAACTTGTCGGAAAATTGCCTAA 800
BSNT_02978___ 801 CGGAACAACAGCTACTGACTTGGCGTTAAAAGTAACACAAGTGCTGCGTG 850
||||||.||.||.||||||||||||.|.|||||.||.|||||||||||.|
RBAM_017800__ 801 CGGAACGACGGCGACTGACTTGGCGCTGAAAGTCACTCAAGTGCTGCGCG 850
BSNT_02978___ 851 AAAAAGGCGTTGTCGGTAAATTTGTTGAATTCTTCGGACCGGGAATTGCT 900
||||||||||.|||..|||||||||||||||||||||.||.||..|||||
RBAM_017800__ 851 AAAAAGGCGTAGTCAATAAATTTGTTGAATTCTTCGGTCCTGGTGTTGCT 900
BSNT_02978___ 901 GAACTGCCGCTTGCAGATCGCGCAACAATTGCGAATATGGCTCCGGAATA 950
||.||.||||||||.|||||.||.||.|||||.||||||||.|||||.||
RBAM_017800__ 901 GAGCTTCCGCTTGCGGATCGGGCGACTATTGCCAATATGGCGCCGGAGTA 950
BSNT_02978___ 951 CGGTGCTACATGCGGATTCTTCCCAGTAGATGAAGAAGCGCTTAACTACC 1000
|||.||.||.||||||||||||||.||.||.||.|||||.|||...||||
RBAM_017800__ 951 CGGAGCGACTTGCGGATTCTTCCCGGTTGACGAGGAAGCACTTTCTTACC 1000
BSNT_02978___ 1001 TGCGCCTGACTGGCCGTGATCCTGAACATATTGATGTTGTTGAAGCATAC 1050
||||.|||||.||||||||....||.||.||.|||.||||.|||||||||
RBAM_017800__ 1001 TGCGTCTGACCGGCCGTGAAGAAGAGCAGATCGATATTGTGGAAGCATAC 1050
BSNT_02978___ 1051 TGCAGAAGCAATGGCTTGTTCTACACTCCAGATGCGGAAGACCCTCAATT 1100
|||.|.|.|||.||.||.|||||.||.||.||.||||||||.||....||
RBAM_017800__ 1051 TGCCGCAACAACGGTTTATTCTATACGCCTGACGCGGAAGAGCCGATTTT 1100
BSNT_02978___ 1101 TACTGATGTGGTTGAAATTGACCTGTCTCAAATTGAAGCAAACTTATCGG 1150
|||.||.||.||.||||||||.|||||..||||||||||.|||.||||.|
RBAM_017800__ 1101 TACAGACGTTGTGGAAATTGATCTGTCAAAAATTGAAGCGAACCTATCAG 1150
BSNT_02978___ 1151 GTCCAAAGCGTCCTCAGGATTTGATCCCGCTATCTGCTATGCAGGAAACG 1200
|.||.||.|||||.||||||||.||||||||.||.|.|||||||||||||
RBAM_017800__ 1151 GACCGAAACGTCCGCAGGATTTAATCCCGCTTTCCGTTATGCAGGAAACG 1200
BSNT_02978___ 1201 TTTAAAAAGCAATTAGTCAGCCCTGCAGGTAACCAAGGATTCGGTTTAA- 1249
||||||||.||..|.||||||||.||.||.|||||||||||||| |
RBAM_017800__ 1201 TTTAAAAAACATCTTGTCAGCCCGGCCGGCAACCAAGGATTCGG----AG 1246
BSNT_02978___ 1250 ---ATGCTGAGGAAGAAAATAAAGAAATTAAGTTTAAACTCCTTAA---C 1293
||||||..|||||.||.|||||||||...|||||| ||||| |
RBAM_017800__ 1247 CGGATGCTGCTGAAGAGAACAAAGAAATTTCATTTAAA---CTTAACAGC 1293
BSNT_02978___ 1294 GGCGAAGAAACAGTTATGAAAACGGGTGCGATCGCCATTGCTGCGATTAC 1343
||.|||||..|.|||||||||||.||.|||||.||.||.||.||.|||||
RBAM_017800__ 1294 GGTGAAGATGCGGTTATGAAAACAGGGGCGATTGCAATCGCCGCTATTAC 1343
BSNT_02978___ 1344 AAGCTGTACAAATACATCAAACCCATACGTTCTGATCGGCGCCGGACTGG 1393
|||||||||.||||||||||||||.|..||..|.|||||.||||||.|||
RBAM_017800__ 1344 AAGCTGTACGAATACATCAAACCCTTTTGTATTAATCGGTGCCGGATTGG 1393
BSNT_02978___ 1394 TAGCGAAAAAAGCGGTTGAGTTAGGGCTT-AAGGTGCCTAATTACGTGAA 1442
||||.|||||||||||.||.||| ||||| ||.|||||.|||||.||.||
RBAM_017800__ 1394 TAGCCAAAAAAGCGGTAGAATTA-GGCTTGAAAGTGCCGAATTATGTTAA 1442
BSNT_02978___ 1443 AACGTCACTTGCACCGGGTTCTAAAGTTGTTACAGGATATCTT-GTGAAT 1491
|||.||||||||||||||.|||||.||||||||.||||| ||| ||.||.
RBAM_017800__ 1443 AACATCACTTGCACCGGGGTCTAAGGTTGTTACTGGATA-CTTAGTCAAC 1491
BSNT_02978___ 1492 TCAGGCCTTCTTCCATACATGAAAGAGCTTGGCTTTAACCTCGTTGGCTA 1541
|||||.||.|||||.||||||||.||||||||||||||||||||.||.||
RBAM_017800__ 1492 TCAGGTCTGCTTCCTTACATGAAGGAGCTTGGCTTTAACCTCGTAGGGTA 1541
BSNT_02978___ 1542 CGGTTGTACAACATGTATCGGGAACTCAGGTCCGCTTTCACCGGAAATCG 1591
.||.|||||.|||||||||||||||||.||.||||||||.||.||.||.|
RBAM_017800__ 1542 TGGCTGTACGACATGTATCGGGAACTCCGGCCCGCTTTCTCCAGAGATTG 1591
BSNT_02978___ 1592 AAGAAGCGGTTGCGAAAAATGATCTTCTGATTACGTCTGTCCTTTCCGGA 1641
|||||||||||||.|||||||||||..||||.||.||||||.|.||.||.
RBAM_017800__ 1592 AAGAAGCGGTTGCTAAAAATGATCTCTTGATCACTTCTGTCTTGTCAGGT 1641
BSNT_02978___ 1642 AACCGTAACTTTGAAGGACGTATTCACCCGCTTGTTAAAGGCAACTATCT 1691
|||.|.|||||||||||.||.||.||.||||||||.|||||.|||||.||
RBAM_017800__ 1642 AACAGAAACTTTGAAGGCCGGATCCATCCGCTTGTCAAAGGAAACTACCT 1691
BSNT_02978___ 1692 TGCTTCACCGCCGCTTGTTGTGGCATATGCGCTGGCTGGAACGGTAAACA 1741
|||.|||||.|||||||||||.|||||.||..|.||.||.||.||.||.|
RBAM_017800__ 1692 TGCGTCACCTCCGCTTGTTGTCGCATACGCATTAGCAGGCACTGTGAATA 1741
BSNT_02978___ 1742 TTAACTTGAAAACCGATCCAATCGGTGTGGGCAAGGATGGTCAAAACGTA 1791
|.|||.|||||||.|||||.||||||||.||.||.||.||.|||||.||.
RBAM_017800__ 1742 TCAACCTGAAAACGGATCCGATCGGTGTCGGAAATGACGGACAAAATGTT 1791
BSNT_02978___ 1792 TACTTTAATGATATTTGGCCGTCAATGGACGAAATCAATGCACTTGTTAA 1841
||.||..||||.||.||||||||.|||||.|||||||||.|.||.||.||
RBAM_017800__ 1792 TATTTCGATGACATCTGGCCGTCCATGGATGAAATCAATTCTCTCGTCAA 1841
BSNT_02978___ 1842 GCAAACTGTTACGCCAGAGCTATTCCGCAAAGAGTATGAAACAGTATTTG 1891
.||.|||||||||||.||..||||||||||||||||||||||.|||||||
RBAM_017800__ 1842 ACAGACTGTTACGCCGGAATTATTCCGCAAAGAGTATGAAACGGTATTTG 1891
BSNT_02978___ 1892 ATGACAACAAGCGCTGGAACGAAATTGAAACAACAGATGAAGCATTATAT 1941
|.||||||.||||||||||||||||.|||||.||.||||||||..|.||.
RBAM_017800__ 1892 ACGACAACCAGCGCTGGAACGAAATCGAAACGACGGATGAAGCGCTGTAC 1941
BSNT_02978___ 1942 AAATGGGAT-AGCGAGTCAACTTACATTCAAAATCCGCCATTCTTCGAAG 1990
||.|||||| || ||.||.||||||||||||||.|||||.|||||.||.|
RBAM_017800__ 1942 AAGTGGGATCAG-GATTCCACTTACATTCAAAACCCGCCGTTCTTTGAGG 1990
BSNT_02978___ 1991 AAATGTCTGTTGAGCCAGGCAAGGTTGAACCATTAAAAGGTTTGCGTGTT 2040
||||||||||.|||||.||.||.|||||.||.||||.|||..|.||.|||
RBAM_017800__ 1991 AAATGTCTGTAGAGCCGGGAAAAGTTGAGCCTTTAAGAGGACTTCGCGTT 2040
BSNT_02978___ 2041 GTCGGTAAATTCGGCGATTCAGTCACAACTGACCATATTTCTCCTGCGGG 2090
|||||.||||||||||||||.||.||.||||||||.||||||||.||.||
RBAM_017800__ 2041 GTCGGCAAATTCGGCGATTCTGTGACGACTGACCACATTTCTCCGGCCGG 2090
BSNT_02978___ 2091 GGCAATCGGAAAAGATACGCCTGCCGGAAAGTATTTGCAAGAAAAAGGTG 2140
.||.|||||||||||.||.||.||.||.||.||..||||.||||||||.|
RBAM_017800__ 2091 AGCGATCGGAAAAGACACACCGGCGGGCAAATACCTGCAGGAAAAAGGCG 2140
BSNT_02978___ 2141 TTTCTCCTCGTGACTTTAACTCCTACGGTTCCCGCCGCGGAAACCATGAA 2190
||||||||||||||||||||||.|||||.||.||||||||||||||||||
RBAM_017800__ 2141 TTTCTCCTCGTGACTTTAACTCTTACGGCTCACGCCGCGGAAACCATGAA 2190
BSNT_02978___ 2191 GTCATGATGAGAGGAACATTTGCAAACATTCGCATCAAAAACCAAATTGC 2240
||||||||||||||||||||.||.||.||.|||||.|||||||||||.||
RBAM_017800__ 2191 GTCATGATGAGAGGAACATTCGCCAATATCCGCATTAAAAACCAAATCGC 2240
BSNT_02978___ 2241 ACCGGGTACAGAAGGCGGATTTACAACGTACTGGCCGACTGGTGAAGTAA 2290
||||||||||||||||||||..|||||..|.|||||.||.||.|||||.|
RBAM_017800__ 2241 ACCGGGTACAGAAGGCGGATACACAACACATTGGCCTACCGGGGAAGTGA 2290
BSNT_02978___ 2291 CATCCATCTATGATGCGTGCATGAAATACAAAGAAGATAAAACTGGTCTT 2340
||||.||.||||||||.||||||...||.||||||||||||||.||||||
RBAM_017800__ 2291 CATCTATTTATGATGCCTGCATGCGGTATAAAGAAGATAAAACGGGTCTT 2340
BSNT_02978___ 2341 GTCGTATTAGCAGGAAAAGACTATGGTATGGGATCTTCACGTGACTGGGC 2390
|||||..|.||.||||||||.||.||.|||||.|||||||||||||||||
RBAM_017800__ 2341 GTCGTCCTGGCCGGAAAAGATTACGGAATGGGCTCTTCACGTGACTGGGC 2390
BSNT_02978___ 2391 TGCAAAAGGAACAAACCTTCTCGGCATCAGAACGGTCATTGCAGAGAGCT 2440
||||||||||||||||||.||.|||||||||||.||||||||.||.||||
RBAM_017800__ 2391 TGCAAAAGGAACAAACCTGCTTGGCATCAGAACAGTCATTGCCGAAAGCT 2440
BSNT_02978___ 2441 TCGAAAGAATTCACAGAAGCAATCTTGTATTCATGGGTGTGCTGCCGCTT 2490
|.||||||||||||||||||||.||.||.|||||||||||||||||||||
RBAM_017800__ 2441 TTGAAAGAATTCACAGAAGCAACCTCGTCTTCATGGGTGTGCTGCCGCTT 2490
BSNT_02978___ 2491 CAGTTTAAACAAGGTGAAAATGCGGATACACTCGGCTTAACGGGTAAAGA 2540
|||||.|||||.||||||||.||||||||||||||||||||.|||||.||
RBAM_017800__ 2491 CAGTTCAAACAGGGTGAAAACGCGGATACACTCGGCTTAACCGGTAAGGA 2540
BSNT_02978___ 2541 AGTCATTGAGGTAGATGTTGATGAAACAGTTCGTCCTCGTGACCTTG-TG 2589
||||||.|||||.||||||||||||.|.||.|||||.||.|| |||| ||
RBAM_017800__ 2541 AGTCATCGAGGTGGATGTTGATGAATCTGTACGTCCGCGCGA-CTTGCTG 2589
BSNT_02978___ 2590 ACTGTAAGAGCAATCAATGAAGACGGCAATGTAACAACTTTTGAAGCAGT 2639
|||||.||||||||||.|||||||||.|..||||.|||.|||||||..||
RBAM_017800__ 2590 ACTGTCAGAGCAATCAGTGAAGACGGTACGGTAAAAACATTTGAAGTTGT 2639
BSNT_02978___ 2640 CGTCCGCTTTGATAGTGAAGTTGAAATTGATTACTACCGCCATGGCGGCA 2689
.|||||.|||||.||||||||.||||||||||||||.|||||.|||||||
RBAM_017800__ 2640 TGTCCGTTTTGACAGTGAAGTGGAAATTGATTACTATCGCCACGGCGGCA 2689
BSNT_02978___ 2690 TCCTTCAAATGGTGCTTCGTGAAAAAATGAAGCAGTCCTGA- 2730
|..|.||||||||||||||.||.||||||||.|||| |
RBAM_017800__ 2690 TTTTACAAATGGTGCTTCGCGATAAAATGAAACAGT----AG 2727
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