Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02969 and RBAM_017750

See DNA alignment / Visit BSNT_02969 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:49
# Commandline: needle
#    -asequence pep-align/BSNT_02969___yneJ.1.9828.seq
#    -bsequence pep-align/RBAM_017750___ccdC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02969___yneJ-RBAM_017750___ccdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02969___yneJ-RBAM_017750___ccdC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02969___yneJ
# 2: RBAM_017750___ccdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 160
# Identity:     138/160 (86.2%)
# Similarity:   152/160 (95.0%)
# Gaps:           0/160 ( 0.0%)
# Score: 704.0
# 
#
#=======================================

BSNT_02969___      1 MMIIVSSIIAVLMAVAVMVVRIKSSDKPVSPKKIILPPIFMSTGALMFLF     50
                     ||||:||:||..||::||:|||||||||.|||||||||||||||||||||
RBAM_017750__      1 MMIIISSVIAAAMAISVMIVRIKSSDKPASPKKIILPPIFMSTGALMFLF     50

BSNT_02969___     51 PVFWVTGAEFLEAFTLGVIFSIFLIKTSKFEIKNNEIYMKRSKAFVFILV    100
                     |:|.|||.|||||.||||||||||||||||||||||||:||||||||||:
RBAM_017750__     51 PIFRVTGEEFLEAITLGVIFSIFLIKTSKFEIKNNEIYLKRSKAFVFILI    100

BSNT_02969___    101 GLLVIRIVMKSILSTSIDYGALSGMFWILAFGMIVPWRIAMYLSYRKLHN    150
                     |||||||.|||||||:|||||||||||||||||||||||||:||||||.|
RBAM_017750__    101 GLLVIRIAMKSILSTTIDYGALSGMFWILAFGMIVPWRIAMFLSYRKLSN    150

BSNT_02969___    151 ELQSSNIQMN    160
                     ||::::||||
RBAM_017750__    151 ELKTADIQMN    160


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