Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02968 and RBAM_017740

See DNA alignment / Visit BSNT_02968 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:49
# Commandline: needle
#    -asequence pep-align/BSNT_02968___yneI.1.9828.seq
#    -bsequence pep-align/RBAM_017740___ccdB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02968___yneI-RBAM_017740___ccdB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02968___yneI-RBAM_017740___ccdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02968___yneI
# 2: RBAM_017740___ccdB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:     100/120 (83.3%)
# Similarity:   110/120 (91.7%)
# Gaps:           0/120 ( 0.0%)
# Score: 504.0
# 
#
#=======================================

BSNT_02968___      1 MTRVLVVDDAKFMRVKIREILEEANYIIAGEAADGEQAADLYKKLRPDLV     50
                     ||||||||||||||||||||||.|||.:||||||||:|..:|:|:|||||
RBAM_017740__      1 MTRVLVVDDAKFMRVKIREILESANYTVAGEAADGEEALAVYQKIRPDLV     50

BSNT_02968___     51 TMDITMPVKNGIKALRDILTFDPKAKVIMCTAMRQQRIVTEAIELGAKDF    100
                     ||||||||||||:||:|||.|||||::||||||||||||.||||||||||
RBAM_017740__     51 TMDITMPVKNGIQALQDILAFDPKARIIMCTAMRQQRIVLEAIELGAKDF    100

BSNT_02968___    101 IVKPFEETKVLEAVSRVMGH    120
                     ||||||.:||||||.||.|.
RBAM_017740__    101 IVKPFEASKVLEAVGRVTGT    120


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