Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02968 and RBAM_017740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:49
# Commandline: needle
# -asequence dna-align/BSNT_02968___yneI.1.9828.seq
# -bsequence dna-align/RBAM_017740___ccdB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02968___yneI-RBAM_017740___ccdB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02968___yneI-RBAM_017740___ccdB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02968___yneI
# 2: RBAM_017740___ccdB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 369
# Identity: 285/369 (77.2%)
# Similarity: 285/369 (77.2%)
# Gaps: 12/369 ( 3.3%)
# Score: 1112.0
#
#
#=======================================
BSNT_02968___ 1 ATGACAAGAGTTTTAGTTGTAGACGACGCCAAGTTCATGAGAGTGAAAAT 50
||||||.||||||||||||||||.|||||||||||||||||.||||||||
RBAM_017740__ 1 ATGACACGAGTTTTAGTTGTAGATGACGCCAAGTTCATGAGGGTGAAAAT 50
BSNT_02968___ 51 CAGAGAGATCTTGGAAGAGGCAAATTACATAATCGCAGGCGAAGCGGCGG 100
|||||||||..|||||..|||.|||||||.|.|.||.||.||||||||.|
RBAM_017740__ 51 CAGAGAGATTCTGGAATCGGCGAATTACACAGTGGCCGGGGAAGCGGCTG 100
BSNT_02968___ 101 ACGGTGAACAAGCAGCTGACCTG------TATAAAAAACTGCGCCCGGAC 144
||||.||..|||| |||| |||.|||||.|.||.||.|||
RBAM_017740__ 101 ACGGCGAGGAAGC------CCTGGCAGTATATCAAAAAATCCGTCCCGAC 144
BSNT_02968___ 145 CTTGTGACAATGGATATTACAATGCCGGTGAAAAACGGCATAAAAGCGCT 194
||.|||||||||||||||||.||||||||.||||||||.|||.|.||.||
RBAM_017740__ 145 CTGGTGACAATGGATATTACCATGCCGGTCAAAAACGGTATACAGGCCCT 194
BSNT_02968___ 195 TCGTGATATCTTAACCTTTGATCCTAAAGCGAAGGTCATCATGTGCACCG 244
.|..|||||.|||.|.|||||.||.|||||...|.|||||||||||||||
RBAM_017740__ 195 GCAGGATATTTTAGCTTTTGACCCGAAAGCCCGGATCATCATGTGCACCG 244
BSNT_02968___ 245 CCATGCGCCAGCAAAGAATTGTAACGGAAGCAATTGAGCTGGGGGCAAAG 294
|||||||.|||||..|.||.||...||||||.|||||..|.||.||.||.
RBAM_017740__ 245 CCATGCGGCAGCAGCGGATCGTTCTGGAAGCGATTGAATTAGGCGCTAAA 294
BSNT_02968___ 295 GATTTTATTGTTAAGCCGTTTGAGGAAACAAAAGTGCTGGAAGCTGTAAG 344
||.|||||.|||||.||||||||.|.|.|.|||||||||||.||.|||.|
RBAM_017740__ 295 GACTTTATCGTTAAACCGTTTGAAGCATCTAAAGTGCTGGAGGCCGTAGG 344
BSNT_02968___ 345 CCGCGTTATGGGACATTAA 363
|||.||.|.||||...|||
RBAM_017740__ 345 CCGGGTAACGGGAACGTAA 363
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