Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02965 and RBAM_017720

See DNA alignment / Visit BSNT_02965 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:49
# Commandline: needle
#    -asequence pep-align/BSNT_02965___ynzD.1.9828.seq
#    -bsequence pep-align/RBAM_017720___ynzD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02965___ynzD-RBAM_017720___ynzD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02965___ynzD-RBAM_017720___ynzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02965___ynzD
# 2: RBAM_017720___ynzD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 63
# Identity:      43/63 (68.3%)
# Similarity:    48/63 (76.2%)
# Gaps:           6/63 ( 9.5%)
# Score: 204.0
# 
#
#=======================================

BSNT_02965___      1 MKGYIPVIREHLLKEIEKKRAELLQIVMANGMTSHITIELSQELDHLLIQ     50
                           :||||||.||||||||||:|||.|||||:|||||||||||||||
RBAM_017720__      1 ------MIREHLLNEIEKKRAELLKIVMTNGMTSNITIELSQELDHLLIQ     44

BSNT_02965___     51 YQKQRLRAVAGDE     63
                     |||:......|:.
RBAM_017720__     45 YQKELHTGSWGET     57


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