Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02965 and RBAM_017720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:49
# Commandline: needle
# -asequence dna-align/BSNT_02965___ynzD.1.9828.seq
# -bsequence dna-align/RBAM_017720___ynzD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02965___ynzD-RBAM_017720___ynzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02965___ynzD-RBAM_017720___ynzD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02965___ynzD
# 2: RBAM_017720___ynzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 198
# Identity: 147/198 (74.2%)
# Similarity: 147/198 (74.2%)
# Gaps: 30/198 (15.2%)
# Score: 607.0
#
#
#=======================================
BSNT_02965___ 1 ATGAAAGGATACATCCCTGTGATTAGAGAGCATCTATTAAAAGAAATTGA 50
|||||||||||||||||||||||.||||||||
RBAM_017720__ 1 ------------------GTGATTAGAGAGCATCTATTAAATGAAATTGA 32
BSNT_02965___ 51 AAAAAAAAGAGCAGAGCTGCTGCAAATTGTCATGGCGAACGGAATGACAT 100
|||||||.|.|||||||||||..||||.||||||.|.|||||||||||||
RBAM_017720__ 33 AAAAAAACGGGCAGAGCTGCTTAAAATCGTCATGACAAACGGAATGACAT 82
BSNT_02965___ 101 CTCATATTACGATAGAGCTCAGTCAGGAGCTTGACCATCTTCTCATACAA 150
|..|.|||||||||||.|||||.||||||||||||||.||||||||||||
RBAM_017720__ 83 CAAACATTACGATAGAACTCAGCCAGGAGCTTGACCACCTTCTCATACAA 132
BSNT_02965___ 151 TATCAAAA------GCAGCGCCTTCGAGCAGTAGCGGGTGATGAATGA 192
||.||||| ||| |.|| .|||||.| ||||||...||||
RBAM_017720__ 133 TACCAAAAAGAACTGCA-CACC----GGCAGTTG-GGGTGAAACATGA 174
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