Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02962 and RBAM_017700

See DNA alignment / Visit BSNT_02962 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:49
# Commandline: needle
#    -asequence pep-align/BSNT_02962___yneE.1.9828.seq
#    -bsequence pep-align/RBAM_017700___yneE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02962___yneE-RBAM_017700___yneE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02962___yneE-RBAM_017700___yneE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02962___yneE
# 2: RBAM_017700___yneE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:     110/148 (74.3%)
# Similarity:   133/148 (89.9%)
# Gaps:           0/148 ( 0.0%)
# Score: 641.0
# 
#
#=======================================

BSNT_02962___      1 MERHYYTYLIKEEFANHYFGRESVMFELFQDYHWTSLEKQQYEMTEKQIQ     50
                     |||||||:|||:||||||||||:.|||||:|||||.|..|:|:|||||:|
RBAM_017700__      1 MERHYYTHLIKDEFANHYFGRETAMFELFRDYHWTDLTPQEYQMTEKQVQ     50

BSNT_02962___     51 YITQPIPILHMHQRLKMNLNKTDYRQLDYIYRIALPKAKGHATFMMKEHM    100
                     |||:|||::||||||:::||:..|.:||.|||:.||..||.||||||:.:
RBAM_017700__     51 YITEPIPVIHMHQRLQLHLNRMSYSRLDSIYRLTLPGEKGRATFMMKDSL    100

BSNT_02962___    101 IEIVASGDYEAETIFFEVLRKVSPCFLAMDFNSKRYGWLNPVKERNFV    148
                     |||.|||||||||||||:|||:|||||||||.::||||||||:|||||
RBAM_017700__    101 IEIAASGDYEAETIFFEILRKISPCFLAMDFKTRRYGWLNPVRERNFV    148


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