Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02960 and RBAM_017690
See
DNA alignment /
Visit
BSNT_02960 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:48
# Commandline: needle
# -asequence pep-align/BSNT_02960___tkt.1.9828.seq
# -bsequence pep-align/RBAM_017690___tkt.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02960___tkt-RBAM_017690___tkt.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02960___tkt-RBAM_017690___tkt.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02960___tkt
# 2: RBAM_017690___tkt
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 667
# Identity: 605/667 (90.7%)
# Similarity: 633/667 (94.9%)
# Gaps: 0/667 ( 0.0%)
# Score: 3158.0
#
#
#=======================================
BSNT_02960___ 1 MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSP 50
||||||||||||||||||||||||||||||||||||||||||||||||:|
RBAM_017690__ 1 MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVNP 50
BSNT_02960___ 51 ANPGWFNRDRFVLSAGHGSALLYSMLHLSGFDLSIEDLKGFRQWGSKTPG 100
.||||||||||||||||||.||||||||||:||||||||.||||||||||
RBAM_017690__ 51 QNPGWFNRDRFVLSAGHGSMLLYSMLHLSGYDLSIEDLKQFRQWGSKTPG 100
BSNT_02960___ 101 HPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017690__ 101 HPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYT 150
BSNT_02960___ 151 YSICGDGDLMEGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSE 200
||||||||||||||||||||||||:|||||||||||||||||||||||||
RBAM_017690__ 151 YSICGDGDLMEGISSEAASLAGHLELGRLIVLYDSNDISLDGDLDRSFSE 200
BSNT_02960___ 201 NVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPTLIEVKTTIGF 250
||||||||||||||||||||||.||||||||||||:||||||||||||||
RBAM_017690__ 201 NVKQRFEAMNWEVLYVEDGNNIAELTAAIEKARQNDKKPTLIEVKTTIGF 250
BSNT_02960___ 251 GSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAV 300
|||||||||||||||||.|||||||||||||:|||||||.|||.||..||
RBAM_017690__ 251 GSPNRAGTSGVHGAPLGLEESKLTKEAYAWTFEEDFYVPEEVYGHFNQAV 300
BSNT_02960___ 301 KESGEKKEQEWNAQFAKYKEVYPELAEQLELAIKGELPKDWDQEVPVYEK 350
||:|.|||||||..||.|||.||||||||.|.:|||||||||||||||||
RBAM_017690__ 301 KEAGSKKEQEWNELFAAYKEKYPELAEQLSLGMKGELPKDWDQEVPVYEK 350
BSNT_02960___ 351 GSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY 400
||||||||||||||||:||||||||||||||||||||||||.|||||.||
RBAM_017690__ 351 GSSLASRASSGEVLNGIAKKIPFFVGGSADLAGSNKTTIKNGGDFTAKDY 400
BSNT_02960___ 401 SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAAL 450
:|||||||||||||||||||||||||||||||||||||||||||||||:|
RBAM_017690__ 401 AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLASL 450
BSNT_02960___ 451 MGLPVTYVFTHDSIAVGEDGPTHEPVEQLASLRAMPNLSLIRPADGNETA 500
|||||||||||||||||||||||||:||||||||:||||:||||||||||
RBAM_017690__ 451 MGLPVTYVFTHDSIAVGEDGPTHEPIEQLASLRALPNLSVIRPADGNETA 500
BSNT_02960___ 501 AAWKLAVQSTDHPTALVLTRQNLPTIDQTAEEALAGVEKGAYVVSKSKNE 550
||||:||||.||||||||||||||||||.||||.||||||||:|||::.|
RBAM_017690__ 501 AAWKVAVQSQDHPTALVLTRQNLPTIDQQAEEAYAGVEKGAYIVSKAQTE 550
BSNT_02960___ 551 TPDALLIASGSEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKN 600
:|.|||:|:||||||||||||:||:|||.||||||||.|||||||.||||
RBAM_017690__ 551 SPAALLLATGSEVGLAIEAQAKLAEENIHVSVVSMPSWDRFEKQSAEYKN 600
BSNT_02960___ 601 EVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGASAPGETIINEY 650
.|||.:|.|||||||||||||||:||||||||.|||||||||||||:.||
RBAM_017690__ 601 SVLPPNVTKRLAIEMGSSFGWGKFTGLEGDVLAIDRFGASAPGETIMKEY 650
BSNT_02960___ 651 GFSVPNVVNRVKALINK 667
||:..|||:|||.|:||
RBAM_017690__ 651 GFTAENVVDRVKKLLNK 667
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.