Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02960 and RBAM_017690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:49
# Commandline: needle
# -asequence dna-align/BSNT_02960___tkt.1.9828.seq
# -bsequence dna-align/RBAM_017690___tkt.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02960___tkt-RBAM_017690___tkt.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02960___tkt-RBAM_017690___tkt.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02960___tkt
# 2: RBAM_017690___tkt
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2024
# Identity: 1604/2024 (79.2%)
# Similarity: 1604/2024 (79.2%)
# Gaps: 40/2024 ( 2.0%)
# Score: 6311.0
#
#
#=======================================
BSNT_02960___ 1 ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAAT 50
|||||||||||||||||||||||||||||.||||||||.|||||.||.||
RBAM_017690__ 1 ATGGATACAATTGAAAAGAAATCAGTTGCCACCATTCGTACACTATCTAT 50
BSNT_02960___ 51 AGACGCTATTGAAAAAGCAAATTCTGGTCACCCAGGGATGCCGATGGGAG 100
||||||.|||||||||||.|||||.||.||.||.||.|||||||||||||
RBAM_017690__ 51 AGACGCAATTGAAAAAGCGAATTCCGGACATCCGGGCATGCCGATGGGAG 100
BSNT_02960___ 101 CCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCG 150
|||||||.||||||||.|||||||||||.|||||||||||.|||| .||.
RBAM_017690__ 101 CCGCTCCGATGGCATATACGCTGTGGACGAAATTTATGAATGTAA-ACCC 149
BSNT_02960___ 151 GCA-AACCCTGGCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGAC 199
||| ||.||.||||||||||||||.|||||.|||||||||||.||.||.|
RBAM_017690__ 150 GCAGAATCCGGGCTGGTTTAACCGCGACCGCTTTGTTTTATCAGCAGGCC 199
BSNT_02960___ 200 ACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGGTTTGATCTT 249
||||.|||...||.||||||||||||||.|||||||||||.|.|||.||.
RBAM_017690__ 200 ACGGTTCAATGCTTTTATACAGCATGCTGCATTTAAGCGGATATGACCTC 249
BSNT_02960___ 250 AGTATTGAAGATCTTAAGGGA-----TTCCGCCAGTGGGGCAGCAAAACA 294
||.|||||||| ||| || |||||.||.|||||.|||||||||
RBAM_017690__ 250 AGCATTGAAGA-CTT----GAAACAGTTCCGTCAATGGGGAAGCAAAACA 294
BSNT_02960___ 295 CCAGGACATCCGGAATTCGGACATACTGCCGGTGTTGATGCTACAACAGG 344
||.|||||||||||.|||||.|||||.|||||.||.||.||.||.||.||
RBAM_017690__ 295 CCGGGACATCCGGAGTTCGGGCATACAGCCGGAGTAGACGCAACTACCGG 344
BSNT_02960___ 345 TCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAAC 394
.||||||||.||.||.|||||.||||||||.||.|||||||||||.||||
RBAM_017690__ 345 GCCGCTTGGACAGGGTATTGCAATGGCAGTGGGAATGGCAATTGCAGAAC 394
BSNT_02960___ 395 GCCATTTAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCAT 444
|||||.|.||.||.|||||.|||||.||||||||.||||||||.||||||
RBAM_017690__ 395 GCCATCTGGCTGAGACATATAACCGTGATTCATTCAACGTAGTTGATCAT 444
BSNT_02960___ 445 TATACATACAGTATTTGCGGTGATGGTGATTTAATGGAAGGTATTTCTTC 494
||||||||||||||||||||.||.||.||||||||||||||.||||||||
RBAM_017690__ 445 TATACATACAGTATTTGCGGAGACGGCGATTTAATGGAAGGCATTTCTTC 494
BSNT_02960___ 495 TGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTAC 544
.|||||||||||.||.||||||||||||.|..|.|||||.|||||||||.
RBAM_017690__ 495 CGAAGCCGCTTCTCTTGCAGGCCATCTTGAATTAGGCCGCCTGATCGTAT 544
BSNT_02960___ 545 TATACGATTCTAATGACATCTCTCTT-GATGGAGACCTCGACCGTTCATT 593
|||||||||||||||||||.|| ||| ||.||.||..|.||||||||.||
RBAM_017690__ 545 TATACGATTCTAATGACATTTC-CTTAGACGGCGATTTAGACCGTTCTTT 593
BSNT_02960___ 594 CTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTCTTT 643
|||||||||.||.||.||||||||||||||||||||.|||||||||||||
RBAM_017690__ 594 CTCTGAAAATGTAAAGCAGCGTTTTGAAGCAATGAACTGGGAAGTTCTTT 643
BSNT_02960___ 644 ATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAA 693
||||||||||.||||||||.||.|..|||||.||.||.||.||.||||||
RBAM_017690__ 644 ATGTTGAGGACGGAAACAACATCGCTGAATTGACGGCTGCAATTGAAAAA 693
BSNT_02960___ 694 GCACGCCAAAATGAAAAGAAACCTACATTAATTGAAGTGAAAACGACAAT 743
||.|||||.|||||.||.|||||.||.||.||||||||||||||||||||
RBAM_017690__ 694 GCGCGCCAGAATGATAAAAAACCGACTTTGATTGAAGTGAAAACGACAAT 743
BSNT_02960___ 744 CGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGC 793
|||.||||||||.||.|||||.||.||.||||||||.||||||||.||.|
RBAM_017690__ 744 CGGTTTCGGTTCTCCAAACCGCGCGGGGACATCCGGCGTTCACGGCGCTC 793
BSNT_02960___ 794 CGCTTGGTAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACA 843
||.|.||...|||.||.|||||..|.|||||||||||.||.||.|||||.
RBAM_017690__ 794 CGTTAGGACTAGAAGAGAGCAAGCTGACAAAAGAAGCGTATGCTTGGACG 843
BSNT_02960___ 844 TATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATGAGCATTTCGCTGC 893
|.|||||||||.||.||.||||||..||||||.||.|.|||||||..|..
RBAM_017690__ 844 TTTGAAGAAGATTTTTATGTTCCGGAAGAAGTATACGGGCATTTCAATCA 893
BSNT_02960___ 894 AGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAAT 943
||||||.||||||.|.||...||||||||||||.||||||||||..|..|
RBAM_017690__ 894 AGCTGTAAAAGAAGCCGGCTCGAAAAAAGAACAGGAATGGAATGAACTGT 943
BSNT_02960___ 944 TCGCTAAATATAAAGAAGTTTATCCTGAACTTGCTGAACAGCTTGAACT- 992
||||....|||||||||...||||||||.||||||||||||||...|||
RBAM_017690__ 944 TCGCGGCTTATAAAGAAAAATATCCTGAGCTTGCTGAACAGCTGTCACTC 993
BSNT_02960___ 993 GGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGTGT 1042
||| ||.|||||.||||||||.||.|||||||||||.||.|||||.||.|
RBAM_017690__ 994 GGC-ATGAAAGGCGAGCTTCCTAAAGACTGGGATCAGGAAGTTCCCGTTT 1042
BSNT_02960___ 1043 ATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTC 1092
||||||||||.||||||||.||.|||||.||||||||.|||||.||.||.
RBAM_017690__ 1043 ATGAAAAAGGCAGCAGCCTTGCTTCCCGCGCATCTTCAGGTGAGGTGCTG 1092
BSNT_02960___ 1093 AACGGACTTGCGAAAAAAATTCCTTTCTTTGTCGGAGGTTCTGCTGACCT 1142
|||||..|.||.||.||||||||||||||||||||.||.|||||||||||
RBAM_017690__ 1093 AACGGGATCGCCAAGAAAATTCCTTTCTTTGTCGGGGGATCTGCTGACCT 1142
BSNT_02960___ 1143 AGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGG 1192
.|||||.||.||.||||||||.||.|||||||..||.||.||.||.||..
RBAM_017690__ 1143 TGCGGGTTCAAATAAAACGACAATCAAAAATGGAGGAGACTTCACGGCCA 1192
BSNT_02960___ 1193 TTGATTACTCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATG 1242
..||.|||.|.||.||||||||||||||.|||||.|||||||||||||||
RBAM_017690__ 1193 AAGACTACGCCGGGAAAAACTTCTGGTTCGGTGTCCGTGAATTTGCGATG 1242
BSNT_02960___ 1243 GGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCTTCGTGTATTCGG 1292
||.||.||.||||||||.|||||||||||.|||||.||.||.||||||||
RBAM_017690__ 1243 GGCGCTGCATTAAACGGAATGGCGCTTCACGGCGGCCTCCGCGTATTCGG 1292
BSNT_02960___ 1293 CGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTG 1342
|||.||.||||||||.|||||||||||..|..|.|||||.|||||.||.|
RBAM_017690__ 1293 CGGCACATTCTTTGTGTTCTCTGATTATTTAAGACCTGCCATTCGTCTGG 1342
BSNT_02960___ 1343 CAGCGTTAATGGGCCTTCCTGTGACATATGTCTTCACACATGACAGTATT 1392
|..|.||.|||||.|||||.||.||.|||||.||||||||||||||||||
RBAM_017690__ 1343 CGTCATTGATGGGTCTTCCCGTCACTTATGTATTCACACATGACAGTATT 1392
BSNT_02960___ 1393 GCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCTTC 1442
||.||.||.||.|||||.|||||.|||||.||..||||.|||||||||||
RBAM_017690__ 1393 GCCGTAGGAGAGGACGGGCCGACTCACGAACCGATTGAGCAGCTTGCTTC 1442
BSNT_02960___ 1443 ACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATG 1492
..|.||.||..|.||||||||||||.|||||.|.||.||.|||||.||||
RBAM_017690__ 1443 TTTACGCGCACTTCCTAACCTTTCTGTGATCAGACCTGCTGACGGAAATG 1492
BSNT_02960___ 1493 AGACAGCAGCAGCATGGAAGCTTGCAGTGCAAAGCACTGACCACCCAACA 1542
|.||.|||||.|||||||||.||||.||.||||||...||.||.||.|||
RBAM_017690__ 1493 AAACCGCAGCTGCATGGAAGGTTGCCGTTCAAAGCCAAGATCATCCGACA 1542
BSNT_02960___ 1543 GCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACA-GCTG 1591
||.||.||..|.|||||.||||||||.||.||.||.|||| |.|| ||||
RBAM_017690__ 1543 GCTCTTGTATTGACACGCCAAAACCTGCCGACGATTGATC-AGCAGGCTG 1591
BSNT_02960___ 1592 AAGAAGCATTGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCT 1641
|||||||.|..||.||.||.||||||||.||.|||.|||||||.|||.|.
RBAM_017690__ 1592 AAGAAGCGTATGCGGGCGTGGAAAAAGGGGCTTATATCGTTTCCAAAGCC 1641
BSNT_02960___ 1642 AAAAACGAAACACCTGACGCTCTTCTCATCGCTTCCGGATCAGAGGTAGG 1691
.|||..|||.||||.|.|||||||||..|.||..|.||.||.||.||.||
RBAM_017690__ 1642 CAAACGGAATCACCGGCCGCTCTTCTTTTAGCGACAGGTTCTGAAGTCGG 1691
BSNT_02960___ 1692 TCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTT 1741
.|||||.||.|||||.||.||..||.||||..|||||||.||..|.||.|
RBAM_017690__ 1692 ACTTGCGATCGAAGCTCAAGCGAAACTGGCTGAAGAAAACATTCACGTAT 1741
BSNT_02960___ 1742 CTGTTGTCAGCATGC----CTTCAATGGACCGTTTTGAGAAACAATCTGA 1787
||||.|||||||||| || .||||||.|||||.||||||||.|.
RBAM_017690__ 1742 CTGTAGTCAGCATGCCGAGCT----GGGACCGCTTTGAAAAACAATCGGC 1787
BSNT_02960___ 1788 TGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAA 1837
.||.|||||||||...||.||||||.|..||||||..|||||||||||.|
RBAM_017690__ 1788 AGAGTACAAAAACAGCGTGCTTCCTCCGAATGTGACGAAACGTCTTGCGA 1837
BSNT_02960___ 1838 TTGAAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGT 1887
|.||||||||.|||...||.||||||||.||||..||.||.||||||||.
RBAM_017690__ 1838 TCGAAATGGGTTCAAGCTTCGGATGGGGTAAATTTACTGGTCTTGAAGGA 1887
BSNT_02960___ 1888 GACGTTCTCGGCATAGACCGATTCGGTGCATCTGCTCCAGGTGAAACCAT 1937
||||||||||..||.|||||.||||||||.||.|||||.||.|||||.||
RBAM_017690__ 1888 GACGTTCTCGCAATTGACCGTTTCGGTGCTTCAGCTCCGGGAGAAACAAT 1937
BSNT_02960___ 1938 CATTAACGAATACGGCTT--CT-CAGTTCCGAACGTAGTGAATCGAGTTA 1984
.||.||.||||||||.|| || ||| ..|||||.||..|.||.||.|
RBAM_017690__ 1938 TATGAAAGAATACGGGTTTACTGCAG---AAAACGTGGTTGACCGCGTGA 1984
BSNT_02960___ 1985 AGGCA---TTAATC-AATAAGTAA 2004
|...| ||||.| |||||
RBAM_017690__ 1985 AAAAACTTTTAAACAAATAA---- 2004
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