Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02959 and RBAM_017680

See DNA alignment / Visit BSNT_02959 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:48
# Commandline: needle
#    -asequence pep-align/BSNT_02959___ynzC.1.9828.seq
#    -bsequence pep-align/RBAM_017680___ynzC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02959___ynzC-RBAM_017680___ynzC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02959___ynzC-RBAM_017680___ynzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02959___ynzC
# 2: RBAM_017680___ynzC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 77
# Identity:      66/77 (85.7%)
# Similarity:    70/77 (90.9%)
# Gaps:           0/77 ( 0.0%)
# Score: 332.0
# 
#
#=======================================

BSNT_02959___      1 MISNAKIARINELAAKAKAGVITEEEKAEQQKLRQEYLKGFRSSMKNTLK     50
                     |||..|||||||||.|||:..||:||||||||||||||||||||||||||
RBAM_017680__      1 MISKEKIARINELAQKAKSNTITDEEKAEQQKLRQEYLKGFRSSMKNTLK     50

BSNT_02959___     51 SVKIIDPEGNDVTPEKLKREQRNNKLH     77
                     |||:|||||||||||||||||:.|.||
RBAM_017680__     51 SVKVIDPEGNDVTPEKLKREQQKNNLH     77


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