Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02959 and RBAM_017680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:48
# Commandline: needle
# -asequence dna-align/BSNT_02959___ynzC.1.9828.seq
# -bsequence dna-align/RBAM_017680___ynzC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02959___ynzC-RBAM_017680___ynzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02959___ynzC-RBAM_017680___ynzC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02959___ynzC
# 2: RBAM_017680___ynzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 235
# Identity: 182/235 (77.4%)
# Similarity: 182/235 (77.4%)
# Gaps: 2/235 ( 0.9%)
# Score: 686.0
#
#
#=======================================
BSNT_02959___ 1 ATGATTTCAAACGCGAAAATTGCCAGAATTAATGAACTTGCTGCCAAAGC 50
||||||||.||.|..|||||.||.||||||||.|||.|.|||...|||||
RBAM_017680__ 1 ATGATTTCTAAAGAAAAAATCGCAAGAATTAACGAATTGGCTCAAAAAGC 50
BSNT_02959___ 51 TAAAGCTGGCGTTATTACAGAAGAAGAAAAAGCCGAACAGCAAAAGCTCC 100
||||.|...|...||.||.||.||.||||||||.||||||||||||||.|
RBAM_017680__ 51 TAAATCAAACACGATAACGGATGAGGAAAAAGCTGAACAGCAAAAGCTTC 100
BSNT_02959___ 101 GTCAAGAGTACTTGAAAGGTTTTCGTTCTTCTATGAAGAACACGTTAAAA 150
|.||.|||||.||||||||.||.||.||.||.|||||.||.||||||||.
RBAM_017680__ 101 GCCAGGAGTATTTGAAAGGATTCCGCTCCTCAATGAAAAATACGTTAAAG 150
BSNT_02959___ 151 AGTGTGAAAATCATTGACCCAGAAGGCAATGATGTTACACCAGAAAAGCT 200
||.||.|||.|.|||||.||.||||||||.|||||.||.||.|||||..|
RBAM_017680__ 151 AGCGTAAAAGTGATTGATCCGGAAGGCAACGATGTCACCCCTGAAAAATT 200
BSNT_02959___ 201 AAAAAGAGAACAA-AGAAATAACAAACTTCACTAA 234
||||||||||||| ||||| ||.||.|||||.|||
RBAM_017680__ 201 AAAAAGAGAACAACAGAAA-AATAATCTTCATTAA 234
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