Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02956 and RBAM_017650
See
DNA alignment /
Visit
BSNT_02956 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:48
# Commandline: needle
# -asequence pep-align/BSNT_02956___lexA.1.9828.seq
# -bsequence pep-align/RBAM_017650___lexA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02956___lexA-RBAM_017650___lexA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02956___lexA-RBAM_017650___lexA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02956___lexA
# 2: RBAM_017650___lexA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 206
# Identity: 192/206 (93.2%)
# Similarity: 199/206 (96.6%)
# Gaps: 1/206 ( 0.5%)
# Score: 971.0
#
#
#=======================================
BSNT_02956___ 1 MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARL 50
||||||||||||||||.|||:|||||||||||||||||||||||||||||
RBAM_017650__ 1 MTKLSKRQLDILRFIKEEVKTKGYPPSVREIGEAVGLASSSTVHGHLARL 50
BSNT_02956___ 51 ETKGLIRRDPTKPRAIEILD-EEVDIPQSQVVNVPVIGKVTAGSPITAVE 99
|||||||||||||||||:|| |||.||:|||||||||||||||.||||||
RBAM_017650__ 51 ETKGLIRRDPTKPRAIEVLDEEEVQIPKSQVVNVPVIGKVTAGIPITAVE 100
BSNT_02956___ 100 NIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANN 149
||:||||||||||||.||||||||||:|||||||.|||||||||||||||
RBAM_017650__ 101 NIDEYFPLPDRMVPPGEHVFMLEIMGESMIDAGIFDKDYVIVKQQNTANN 150
BSNT_02956___ 150 GEIVVAMTEDDEATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIG 199
||||||||||||||||||||||.::|||||||||||||||||||||||||
RBAM_017650__ 151 GEIVVAMTEDDEATVKRFYKEDNYVRLQPENPTMEPIILQNVSILGKVIG 200
BSNT_02956___ 200 VFRTVH 205
||||||
RBAM_017650__ 201 VFRTVH 206
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.