Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02956 and RBAM_017650
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:48
# Commandline: needle
# -asequence dna-align/BSNT_02956___lexA.1.9828.seq
# -bsequence dna-align/RBAM_017650___lexA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02956___lexA-RBAM_017650___lexA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02956___lexA-RBAM_017650___lexA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02956___lexA
# 2: RBAM_017650___lexA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 627
# Identity: 499/627 (79.6%)
# Similarity: 499/627 (79.6%)
# Gaps: 15/627 ( 2.4%)
# Score: 1988.0
#
#
#=======================================
BSNT_02956___ 1 ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGC 50
|||||||||||||||||||||||.|||||||||||.|||||||||||||.
RBAM_017650__ 1 ATGACGAAGCTATCAAAAAGGCAGCTTGATATCCTGCGTTTTATTAAAGA 50
BSNT_02956___ 51 AGAGGTTAAATCAAAAGGATATCCGCCTTCCGTGAGAGAGATCGGAGAGG 100
||||||.|||.|.|||||||||||||||||.||.||||||||.|||||.|
RBAM_017650__ 51 AGAGGTAAAAACGAAAGGATATCCGCCTTCTGTAAGAGAGATAGGAGAAG 100
BSNT_02956___ 101 CTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTG 150
|.||.||.||.||.|||||.||.||.||.||||||||||||||.||..||
RBAM_017650__ 101 CAGTAGGACTGGCTTCCAGTTCAACCGTGCACGGCCATTTGGCGCGGCTG 150
BSNT_02956___ 151 GAAACAAAAGGGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGA 200
||.||||||||.|||||||||||.||.||.||.|||||.||.||.||.||
RBAM_017650__ 151 GAGACAAAAGGCCTGATCAGACGGGACCCAACTAAACCGAGGGCGATTGA 200
BSNT_02956___ 201 AATTCTTGATGAAGAAGTAG---ACATTCCGCAAAGCCAGGTCGTTAATG 247
..|..|.||||||||||.|| |.||||||.|||||||||||||.||.|
RBAM_017650__ 201 GGTATTGGATGAAGAAGAAGTCCAAATTCCGAAAAGCCAGGTCGTAAACG 250
BSNT_02956___ 248 TACCGGTCATCGGGAAAGTCACGGCGGG-ATCTCCTATTACAGCAGTAGA 296
|.|||||||||||||||||.|||||||| || |||.|||||.||.||.||
RBAM_017650__ 251 TTCCGGTCATCGGGAAAGTGACGGCGGGTAT-TCCGATTACGGCTGTTGA 299
BSNT_02956___ 297 AAATATTGAAGAATATTTTCCGCTCCCAGACCGCATGGTTCCTCCAGACG 346
||||||.||.||.|||||||||||.||.|||||.|||||||||||.|.||
RBAM_017650__ 300 AAATATCGACGAGTATTTTCCGCTTCCTGACCGGATGGTTCCTCCGGGCG 349
BSNT_02956___ 347 AGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGT 396
|.|||||.||||||.|.||.||.||||||||.||||||||.||.||.||.
RBAM_017650__ 350 AACATGTCTTTATGTTAGAAATCATGGGAGAAAGTATGATCGACGCCGGC 399
BSNT_02956___ 397 ATTCTCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAA 446
|||.|.||.||.||.||.|||||.||.||||||||||||||.||.||.||
RBAM_017650__ 400 ATTTTTGACAAAGATTACGTCATTGTCAAACAGCAAAACACGGCCAATAA 449
BSNT_02956___ 447 TGGGGAAATTGTAGTTGCAATGACAGAAGATGATGAAGCAACTGTAAAAC 496
.||.|||||.||.||.||.|||||.||||||||||||||.||.||.||.|
RBAM_017650__ 450 CGGAGAAATCGTCGTAGCTATGACCGAAGATGATGAAGCGACGGTCAAGC 499
BSNT_02956___ 497 GATTCTATAAAGAGGATACCCACATT-----CGCTTGCAGCCTGAGAACC 541
|.|||||||||||.||.| ||| ||..|||||||.||.||.|
RBAM_017650__ 500 GCTTCTATAAAGAAGACA-----ATTATGTGCGGCTGCAGCCGGAAAATC 544
BSNT_02956___ 542 CAACGATGGAACCTATCATTTTGCAGAATGTCAGCATTCTAGGGAAAGTG 591
|.||||||||.||.||.||..||||.||.||.||||||.|.||||||||.
RBAM_017650__ 545 CGACGATGGAGCCGATTATCCTGCAAAACGTAAGCATTTTGGGGAAAGTT 594
BSNT_02956___ 592 ATTGGCGTGTTCAGAACCGTCCATTAA 618
||.|||||.|||||.|||||.||||||
RBAM_017650__ 595 ATCGGCGTATTCAGGACCGTACATTAA 621
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