Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02953 and RBAM_017630

See DNA alignment / Visit BSNT_02953 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:48
# Commandline: needle
#    -asequence pep-align/BSNT_02953.1.9828.seq
#    -bsequence pep-align/RBAM_017630___yndM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02953-RBAM_017630___yndM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02953-RBAM_017630___yndM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02953
# 2: RBAM_017630___yndM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:      75/150 (50.0%)
# Similarity:   111/150 (74.0%)
# Gaps:           2/150 ( 1.3%)
# Score: 393.0
# 
#
#=======================================

BSNT_02953         1 MKHIIALASKIAFTLALLYVILDRVYHASFLSVMFIALFLGFVSYLSGDM     50
                     |||:||.|||.|.||||||::||.:|..:||:|:||.:.|..::|.:||.
RBAM_017630__      1 MKHVIAFASKTALTLALLYIVLDLMYQVTFLNVLFITVILSLITYFAGDC     50

BSNT_02953        51 LVLPRTNNITASLADFGLSFVILWVFVLTQTRNDFSPFGAALLSAACLTV    100
                     ::||||:|.||..||||:||:|||:|::.....:.||..|:::||.|::|
RBAM_017630__     51 MILPRTSNFTAVAADFGISFIILWIFLMNIGGFNVSPAVASVISALCISV    100

BSNT_02953       101 FEFFFHRYLLKNVLDENFRNELSARDNTL-QYQTEAADELFPETNEKHKE    149
                     ||.||||||.:.||.|::: :.:..|:|| .|||||::||.||.:.:.|.
RBAM_017630__    101 FEAFFHRYLQQYVLPEDYQ-DTTETDSTLWSYQTEASEELVPEKDPQEKT    149


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